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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001081278.3 → NP_001074747.2 TBC1 domain family member 4 isoform 3
Status: VALIDATED
- Source sequence(s)
-
CT025630, CT573019, CT573033
- Consensus CDS
-
CCDS49556.1
- UniProtKB/TrEMBL
-
E9Q6Q8
- Related
- ENSMUSP00000125509.2, ENSMUST00000161991.8
- Conserved Domains (5) summary
-
- smart00164
Location:863 → 1077
- TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
- smart00462
Location:31 → 190
- PTB; Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain
- cd01269
Location:193 → 444
- PTB_TBC1D1_like; TBC1 domain family member 1 and related proteins Phosphotyrosine-binding (PTB) domain
- pfam11830
Location:751 → 809
- DUF3350; Domain of unknown function (DUF3350)
- pfam13094
Location:1137 → 1215
- CENP-Q; CENP-Q, a CENPA-CAD centromere complex subunit
-
NM_001404671.1 → NP_001391600.1 TBC1 domain family member 4 isoform 1
Status: VALIDATED
- Source sequence(s)
-
CT025630, CT573019, CT573033
-
NM_001404672.1 → NP_001391601.1 TBC1 domain family member 4 isoform 2
Status: VALIDATED
- Source sequence(s)
-
CT025630, CT573019, CT573033
-
NM_001404673.1 → NP_001391602.1 TBC1 domain family member 4 isoform 4
Status: VALIDATED
- Source sequence(s)
-
CT025630, CT573019, CT573033
-
NM_001404674.1 → NP_001391603.1 TBC1 domain family member 4 isoform 5
Status: VALIDATED
- Source sequence(s)
-
CT573019, CT573033
- UniProtKB/TrEMBL
-
F6SUV7
- Related
- ENSMUSP00000124511.2, ENSMUST00000159951.8
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000080.7 Reference GRCm39 C57BL/6J
- Range
-
101679800..101846717 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006518763.4 → XP_006518826.1 TBC1 domain family member 4 isoform X7
- Conserved Domains (5) summary
-
- smart00164
Location:864 → 1078
- TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
- smart00462
Location:31 → 190
- PTB; Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain
- PTZ00440
Location:1078 → 1209
- PTZ00440; reticulocyte binding protein 2-like protein; Provisional
- cd01269
Location:193 → 444
- PTB_TBC1D1_like; TBC1 domain family member 1 and related proteins Phosphotyrosine-binding (PTB) domain
- pfam11830
Location:751 → 809
- DUF3350; Domain of unknown function (DUF3350)
-
XM_017315935.2 → XP_017171424.1 TBC1 domain family member 4 isoform X5
- Conserved Domains (5) summary
-
- smart00164
Location:872 → 1086
- TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
- smart00462
Location:31 → 190
- PTB; Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain
- PTZ00440
Location:1086 → 1217
- PTZ00440; reticulocyte binding protein 2-like protein; Provisional
- cd01269
Location:193 → 444
- PTB_TBC1D1_like; TBC1 domain family member 1 and related proteins Phosphotyrosine-binding (PTB) domain
- pfam11830
Location:759 → 817
- DUF3350; Domain of unknown function (DUF3350)
-
XM_006518761.4 → XP_006518824.1 TBC1 domain family member 4 isoform X3
- Conserved Domains (5) summary
-
- smart00164
Location:919 → 1133
- TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
- smart00462
Location:31 → 190
- PTB; Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain
- PTZ00440
Location:1133 → 1264
- PTZ00440; reticulocyte binding protein 2-like protein; Provisional
- cd01269
Location:193 → 444
- PTB_TBC1D1_like; TBC1 domain family member 1 and related proteins Phosphotyrosine-binding (PTB) domain
- pfam11830
Location:806 → 864
- DUF3350; Domain of unknown function (DUF3350)
-
XM_006518760.4 → XP_006518823.1 TBC1 domain family member 4 isoform X2
- UniProtKB/TrEMBL
-
E0CX53
- Related
- ENSMUSP00000124909.2, ENSMUST00000162617.8
- Conserved Domains (5) summary
-
- smart00164
Location:926 → 1140
- TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
- smart00462
Location:31 → 190
- PTB; Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain
- PTZ00440
Location:1140 → 1271
- PTZ00440; reticulocyte binding protein 2-like protein; Provisional
- cd01269
Location:193 → 444
- PTB_TBC1D1_like; TBC1 domain family member 1 and related proteins Phosphotyrosine-binding (PTB) domain
- pfam11830
Location:814 → 872
- DUF3350; Domain of unknown function (DUF3350)
-
XM_006518759.4 → XP_006518822.1 TBC1 domain family member 4 isoform X1
See identical proteins and their annotated locations for XP_006518822.1
- UniProtKB/Swiss-Prot
- Q149C0, Q149C1, Q3T9E8, Q3TAQ5, Q5DU23, Q66JU2, Q6P2M2, Q8BMH6, Q8BXM2, Q8BYJ6
- Conserved Domains (5) summary
-
- smart00164
Location:927 → 1141
- TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
- smart00462
Location:31 → 190
- PTB; Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain
- PTZ00440
Location:1141 → 1272
- PTZ00440; reticulocyte binding protein 2-like protein; Provisional
- cd01269
Location:193 → 444
- PTB_TBC1D1_like; TBC1 domain family member 1 and related proteins Phosphotyrosine-binding (PTB) domain
- pfam11830
Location:814 → 872
- DUF3350; Domain of unknown function (DUF3350)
-
XM_017315937.3 → XP_017171426.1 TBC1 domain family member 4 isoform X9
- UniProtKB/TrEMBL
-
F6SUV7
- Conserved Domains (4) summary
-
- smart00164
Location:772 → 986
- TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
- PTZ00440
Location:986 → 1117
- PTZ00440; reticulocyte binding protein 2-like protein; Provisional
- cd01269
Location:38 → 289
- PTB_TBC1D1_like; TBC1 domain family member 1 and related proteins Phosphotyrosine-binding (PTB) domain
- pfam11830
Location:659 → 717
- DUF3350; Domain of unknown function (DUF3350)
-
XM_030247707.2 → XP_030103567.1 TBC1 domain family member 4 isoform X10
- UniProtKB/TrEMBL
-
F6SUV7
- Conserved Domains (4) summary
-
- smart00164
Location:709 → 923
- TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
- PTZ00440
Location:923 → 1054
- PTZ00440; reticulocyte binding protein 2-like protein; Provisional
- cd01269
Location:38 → 289
- PTB_TBC1D1_like; TBC1 domain family member 1 and related proteins Phosphotyrosine-binding (PTB) domain
- pfam11830
Location:596 → 654
- DUF3350; Domain of unknown function (DUF3350)
-
XM_006518767.2 → XP_006518830.1 TBC1 domain family member 4 isoform X13
- Conserved Domains (3) summary
-
- smart00164
Location:245 → 459
- TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
- PTZ00440
Location:459 → 590
- PTZ00440; reticulocyte binding protein 2-like protein; Provisional
- pfam11830
Location:132 → 190
- DUF3350; Domain of unknown function (DUF3350)
-
XM_017315938.1 → XP_017171427.1 TBC1 domain family member 4 isoform X14
- Related
-
ENSMUST00000161304.2
- Conserved Domains (2) summary
-
- smart00164
Location:11 → 225
- TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
- PTZ00440
Location:225 → 356
- PTZ00440; reticulocyte binding protein 2-like protein; Provisional
-
XM_006518764.5 → XP_006518827.1 TBC1 domain family member 4 isoform X8
- Conserved Domains (4) summary
-
- smart00164
Location:927 → 1141
- TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
- smart00462
Location:31 → 190
- PTB; Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain
- cd01269
Location:193 → 444
- PTB_TBC1D1_like; TBC1 domain family member 1 and related proteins Phosphotyrosine-binding (PTB) domain
- pfam11830
Location:814 → 872
- DUF3350; Domain of unknown function (DUF3350)
-
XM_011245002.3 → XP_011243304.1 TBC1 domain family member 4 isoform X11
See identical proteins and their annotated locations for XP_011243304.1
- UniProtKB/TrEMBL
-
H7BX82
- Related
- ENSMUSP00000097913.4, ENSMUST00000100340.4
- Conserved Domains (3) summary
-
- smart00462
Location:31 → 190
- PTB; Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain
- cd01269
Location:193 → 444
- PTB_TBC1D1_like; TBC1 domain family member 1 and related proteins Phosphotyrosine-binding (PTB) domain
- pfam11830
Location:751 → 809
- DUF3350; Domain of unknown function (DUF3350)
-
XM_006518766.5 → XP_006518829.1 TBC1 domain family member 4 isoform X12
- UniProtKB/TrEMBL
-
H7BX82
- Conserved Domains (2) summary
-
- smart00462
Location:31 → 190
- PTB; Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain
- cd01269
Location:193 → 444
- PTB_TBC1D1_like; TBC1 domain family member 1 and related proteins Phosphotyrosine-binding (PTB) domain
RNA
-
XR_001781101.2 RNA Sequence
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_173380.1: Suppressed sequence
- Description
- NM_173380.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.