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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001159354.1 → NP_001152826.1 membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform 1
See identical proteins and their annotated locations for NP_001152826.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AC122324, AC129293, AC162922
- Consensus CDS
-
CCDS51031.1
- UniProtKB/Swiss-Prot
- B0V3N7, B0V3N8, Q69ZE1, Q8C0P8, Q9EQJ9
- UniProtKB/TrEMBL
-
G5E8T6
- Related
- ENSMUSP00000112934.2, ENSMUST00000121198.8
- Conserved Domains (6) summary
-
- smart00456
Location:297 → 329
- WW; Domain with 2 conserved Trp (W) residues
- smart00228
Location:416 → 496
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00201
Location:345 → 375
- WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
- cd00992
Location:1023 → 1101
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam10243
Location:1166 → 1431
- MIP-T3; Microtubule-binding protein MIP-T3
- cl17190
Location:125 → 199
- NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
-
NM_133853.3 → NP_598614.1 membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform 2
See identical proteins and their annotated locations for NP_598614.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 3' coding region and 3' UTR, compared to variant 1. The encoded protein (isoform 2) is shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC122324, AC129293, AC162922
- Consensus CDS
-
CCDS17699.1
- UniProtKB/Swiss-Prot
-
Q9EQJ9
- Related
- ENSMUSP00000067932.8, ENSMUST00000064371.14
- Conserved Domains (4) summary
-
- smart00456
Location:297 → 329
- WW; Domain with 2 conserved Trp (W) residues
- smart00228
Location:416 → 496
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00992
Location:1023 → 1101
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cl17190
Location:125 → 199
- NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000069.7 Reference GRCm39 C57BL/6J
- Range
-
103920575..104127722 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)