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    Uap1l1 UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 [ Mus musculus (house mouse) ]

    Gene ID: 227620, updated on 9-Dec-2024

    Summary

    Official Symbol
    Uap1l1provided by MGI
    Official Full Name
    UDP-N-acteylglucosamine pyrophosphorylase 1-like 1provided by MGI
    Primary source
    MGI:MGI:2443318
    See related
    Ensembl:ENSMUSG00000026956 AllianceGenome:MGI:2443318
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    5730445F03Rik
    Summary
    Predicted to enable UDP-N-acetylglucosamine diphosphorylase activity. Predicted to be involved in UDP-N-acetylglucosamine biosynthetic process. Orthologous to human UAP1L1 (UDP-N-acetylglucosamine pyrophosphorylase 1 like 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Broad expression in placenta adult (RPKM 65.1), duodenum adult (RPKM 59.5) and 20 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Uap1l1 in Genome Data Viewer
    Location:
    2 A3; 2 17.19 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (25251501..25255695, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (25361489..25365682, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene dipeptidylpeptidase 7 Neighboring gene predicted gene, 46732 Neighboring gene STARR-positive B cell enhancer ABC_E9505 Neighboring gene suppressor APC domain containing 2 Neighboring gene ectonucleoside triphosphate diphosphohydrolase 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Spontaneous (1)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    UDP-N-acetylhexosamine pyrophosphorylase-like protein 1
    NP_001028465.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033293.3NP_001028465.1  UDP-N-acetylhexosamine pyrophosphorylase-like protein 1

      See identical proteins and their annotated locations for NP_001028465.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the protein-coding transcript.
      Source sequence(s)
      AK159787, AL732557, BE944661, BY096323
      Consensus CDS
      CCDS15767.1
      UniProtKB/Swiss-Prot
      A1L3D3, Q3TW96, Q6KAP8, Q6NVB6, Q80XP4
      UniProtKB/TrEMBL
      Q8BVK3
      Related
      ENSMUSP00000099989.4, ENSMUST00000102925.4
      Conserved Domains (1) summary
      cd04193
      Location:92413
      UDPGlcNAc_PPase; UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc

    RNA

    1. NR_149315.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate splice junction compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
      Source sequence(s)
      AK131159, BE944661, BY096323

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      25251501..25255695 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_004939546.1 RNA Sequence

    2. XR_374072.5 RNA Sequence