U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    n-R5s136 nuclear encoded rRNA 5S 136 [ Mus musculus (house mouse) ]

    Gene ID: 100861491, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    n-R5s136provided by MGI
    Official Full Name
    nuclear encoded rRNA 5S 136provided by MGI
    Primary source
    MGI:MGI:4421992
    See related
    Ensembl:ENSMUSG00000118945 AllianceGenome:MGI:4421992
    Gene type
    rRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Rn5s20
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See n-R5s136 in Genome Data Viewer
    Location:
    8 E1; 8 72.1 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (124326598..124326718, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (123599859..123599979, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr8:126120285-126120586 Neighboring gene nuclear encoded rRNA 5S 134 Neighboring gene 5S RNA Neighboring gene STARR-positive B cell enhancer mm9_chr8:126124984-126125284 Neighboring gene 5S RNA, pseudogene 1 Neighboring gene nuclear encoded rRNA 5S 138

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequences and evolutionary analysis of mouse 5S rDNAs. Suzuki H, et al. Mol Biol Evol, 1994 Jul. PMID 8078409
    2. Characterization of 5S rRNA genes from mouse. Hallenberg C, et al. Gene, 1994 May 16. PMID 8194767
    3. Rfam: updates to the RNA families database. Gardner PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18953034, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Other Names

    • 5S RNA 20
    • RNA, 5S ribosomal 20

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_046144.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC141881
      Related
      ENSMUST00000240469.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      124326598..124326718 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials