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    GPR20 G protein-coupled receptor 20 [ Homo sapiens (human) ]

    Gene ID: 2843, updated on 10-Dec-2024

    Summary

    Official Symbol
    GPR20provided by HGNC
    Official Full Name
    G protein-coupled receptor 20provided by HGNC
    Primary source
    HGNC:HGNC:4475
    See related
    Ensembl:ENSG00000204882 MIM:601908; AllianceGenome:HGNC:4475
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    Enables G protein-coupled receptor activity. Predicted to be involved in phospholipase C-activating G protein-coupled receptor signaling pathway and positive regulation of Rho protein signal transduction. Located in cytosol and plasma membrane. Part of receptor complex. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See GPR20 in Genome Data Viewer
    Location:
    8q24.3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (141356470..141367286, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (142477922..142488738, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (142366570..142377386, complement)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene solute carrier family 45 member 4 Neighboring gene SLC45A4 antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142268351-142268872 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142280921-142281591 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142281592-142282261 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142286540-142287116 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142288141-142288950 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142291898-142292707 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:142293955-142294169 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142299831-142300486 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142309143-142309849 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142309892-142310741 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142310742-142311590 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19591 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19592 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142334125-142334625 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142339206-142339742 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142339743-142340277 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142345611-142346110 Neighboring gene Sharpr-MPRA regulatory region 12881 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142352272-142352772 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142355946-142356566 Neighboring gene long intergenic non-protein coding RNA 1300 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142361861-142362840 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142366583-142367204 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142367205-142367826 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142369677-142370273 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142378149-142378698 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:142379063-142379245 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142382601-142383224 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142383225-142383848 Neighboring gene uncharacterized LOC101928037 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142385104-142385878 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142385879-142386654 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:142386655-142387429 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142394223-142394840 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:142401193-142401813 Neighboring gene antisense transcript of PTP4A3, liver carcinoma survival associated Neighboring gene protein tyrosine phosphatase 4A3

    Genomic regions, transcripts, and products

    Phenotypes

    EBI GWAS Catalog

    Description
    Large-scale genome-wide association analysis of bipolar disorder identifies a new susceptibility locus near ODZ4.
    EBI GWAS Catalog

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables G protein-coupled receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane TAS
    Traceable Author Statement
    more info
     
    part_of receptor complex IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    G-protein coupled receptor 20
    Names
    CTD-3064M3.3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_005293.3NP_005284.2  G-protein coupled receptor 20

      See identical proteins and their annotated locations for NP_005284.2

      Status: VALIDATED

      Source sequence(s)
      AA601037, AB209066, AC100803, DR006873
      Consensus CDS
      CCDS34949.1
      UniProtKB/Swiss-Prot
      Q17R96, Q99678
      UniProtKB/TrEMBL
      H9NIL3
      Related
      ENSP00000366970.3, ENST00000377741.4
      Conserved Domains (1) summary
      pfam00001
      Location:71297
      7tm_1; 7 transmembrane receptor (rhodopsin family)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      141356470..141367286 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_025791786.1 Reference GRCh38.p14 PATCHES

      Range
      23024..33840 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187574.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      23024..33840 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      142477922..142488738 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)