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    INTS4 integrator complex subunit 4 [ Gallus gallus (chicken) ]

    Gene ID: 419028, updated on 17-Aug-2024

    Summary

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    Symbol
    INTS4provided by CGNC
    Full Name
    integrator complex subunit 4provided by CGNC
    Primary source
    CGNC:50899
    See related
    Ensembl:ENSGALG00010001997
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    INT4
    Orthologs
    human mouse all
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    Genomic context

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    See INTS4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (192768376..192800698)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (192837967..192870321)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene thyroid hormone responsive Neighboring gene potassium channel tetramerization domain containing 14 Neighboring gene adipogenesis associated, Mth938 domain containing Neighboring gene remodeling and spacing factor 1 Neighboring gene microRNA mir-12215 Neighboring gene chloride nucleotide-sensitive channel 1A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in snRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of integrator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    integrator complex subunit 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      192768376..192800698
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015280874.4 → XP_015136360.1  integrator complex subunit 4 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XEA1, A0A8V0XEA7
      Related
      ENSGALP00010002760.1, ENSGALT00010004538.1
      Conserved Domains (1) summary
      sd00044
      Location:213 → 235
      HEAT; HEAT repeat [structural motif]

    2. XM_040704624.2 → XP_040560558.1  integrator complex subunit 4 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XEA1
      Conserved Domains (1) summary
      sd00044
      Location:212 → 234
      HEAT; HEAT repeat [structural motif]

    3. XM_015280875.4 → XP_015136361.1  integrator complex subunit 4 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XEA1
      Conserved Domains (2) summary
      sd00044
      Location:200 → 222
      HEAT; HEAT repeat [structural motif]
      pfam01602
      Location:380 → 461
      Adaptin_N; Adaptin N terminal region

    4. XM_025146937.3 → XP_025002705.1  integrator complex subunit 4 isoform X4

      UniProtKB/TrEMBL
      A0A8V0XEA1
      Conserved Domains (2) summary
      sd00044
      Location:199 → 221
      HEAT; HEAT repeat [structural motif]
      pfam01602
      Location:379 → 460
      Adaptin_N; Adaptin N terminal region

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      192837967..192870321
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040657577.2 → XP_040513511.1  integrator complex subunit 4 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XEA1, A0A8V0XEA7
      Conserved Domains (1) summary
      sd00044
      Location:213 → 235
      HEAT; HEAT repeat [structural motif]

    2. XM_040657578.2 → XP_040513512.1  integrator complex subunit 4 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XEA1
      Conserved Domains (1) summary
      sd00044
      Location:212 → 234
      HEAT; HEAT repeat [structural motif]

    3. XM_040657579.2 → XP_040513513.1  integrator complex subunit 4 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XEA1
      Conserved Domains (2) summary
      sd00044
      Location:200 → 222
      HEAT; HEAT repeat [structural motif]
      pfam01602
      Location:380 → 461
      Adaptin_N; Adaptin N terminal region

    4. XM_040657580.2 → XP_040513514.1  integrator complex subunit 4 isoform X4

      UniProtKB/TrEMBL
      A0A8V0XEA1
      Conserved Domains (2) summary
      sd00044
      Location:199 → 221
      HEAT; HEAT repeat [structural motif]
      pfam01602
      Location:379 → 460
      Adaptin_N; Adaptin N terminal region
    Nucleotide Protein Strain
    Heading Accession and Version

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