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    TTF1 transcription termination factor 1 [ Gallus gallus (chicken) ]

    Gene ID: 417169, updated on 17-Aug-2024

    Summary

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    Symbol
    TTF1provided by CGNC
    Full Name
    transcription termination factor 1provided by CGNC
    Primary source
    CGNC:21039
    See related
    Ensembl:ENSGALG00010028772
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See TTF1 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 17 NC_052548.1 (7126112..7134188, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 17 NC_052589.1 (6537978..6546055, complement)

    Chromosome 17 - NC_052548.1Genomic Context describing neighboring genes Neighboring gene netrin G2 Neighboring gene uncharacterized LOC107052210 Neighboring gene senataxin Neighboring gene uncharacterized LOC121107109 Neighboring gene cilia and flagella associated protein 77 Neighboring gene BarH like homeobox 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    transcription termination factor 1
    Names
    transcription termination factor, RNA polymerase I

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      7126112..7134188 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040649393.2 → XP_040505327.1  transcription termination factor 1

      UniProtKB/TrEMBL
      R4GLV7
      Related
      ENSGALP00010042887.1, ENSGALT00010069626.1
      Conserved Domains (3) summary
      COG5147
      Location:442 → 623
      REB1; Myb superfamily proteins, including transcription factors and mRNA splicing factors [Transcription / RNA processing and modification / Cell division and chromosome partitioning]
      pfam13921
      Location:460 → 516
      Myb_DNA-bind_6; Myb-like DNA-binding domain
      NF033845
      Location:114 → 306
      MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

    2. XM_040649394.2 → XP_040505328.1  transcription termination factor 1

      UniProtKB/TrEMBL
      R4GLV7
      Conserved Domains (3) summary
      COG5147
      Location:442 → 623
      REB1; Myb superfamily proteins, including transcription factors and mRNA splicing factors [Transcription / RNA processing and modification / Cell division and chromosome partitioning]
      pfam13921
      Location:460 → 516
      Myb_DNA-bind_6; Myb-like DNA-binding domain
      NF033845
      Location:114 → 306
      MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      6537978..6546055 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040686034.2 → XP_040541968.1  transcription termination factor 1

      Conserved Domains (2) summary
      COG5147
      Location:442 → 623
      REB1; Myb superfamily proteins, including transcription factors and mRNA splicing factors [Transcription / RNA processing and modification / Cell division and chromosome partitioning]
      pfam13921
      Location:460 → 516
      Myb_DNA-bind_6; Myb-like DNA-binding domain

    2. XM_040686035.2 → XP_040541969.1  transcription termination factor 1

      Conserved Domains (2) summary
      COG5147
      Location:442 → 623
      REB1; Myb superfamily proteins, including transcription factors and mRNA splicing factors [Transcription / RNA processing and modification / Cell division and chromosome partitioning]
      pfam13921
      Location:460 → 516
      Myb_DNA-bind_6; Myb-like DNA-binding domain
    Nucleotide Protein
    Heading Accession and Version

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