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    GLIPR2 GLI pathogenesis related 2 [ Gallus gallus (chicken) ]

    Gene ID: 420999, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GLIPR2provided by CGNC
    Official Full Name
    GLI pathogenesis related 2provided by CGNC
    Primary source
    CGNC:10184
    See related
    Ensembl:ENSGALG00010007940
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    C9orf19
    Orthologs
    human mouse all
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    Genomic context

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    See GLIPR2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (89365004..89390348, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (89450158..89475471, complement)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene transfer RNA valine (anticodon AAC) Neighboring gene transfer RNA valine (anticodon AAC) Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 4 Neighboring gene par-6 family cell polarity regulator gamma

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Golgi-associated plant pathogenesis-related protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      89365004..89390348 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_419085.8 → XP_419085.1  Golgi-associated plant pathogenesis-related protein 1

      UniProtKB/TrEMBL
      A0A8V0XWV9, R4GGF3
      Related
      ENSGALP00010010482.1, ENSGALT00010018933.1
      Conserved Domains (1) summary
      cd05382
      Location:8 → 139
      CAP_GAPR1-like; CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain of Golgi-associated plant pathogenesis-related protein 1 and similar proteins

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      89450158..89475471 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040665851.2 → XP_040521785.1  Golgi-associated plant pathogenesis-related protein 1

      UniProtKB/TrEMBL
      A0A8V0XWV9, R4GGF3
      Conserved Domains (1) summary
      cd05382
      Location:8 → 139
      CAP_GAPR1-like; CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain of Golgi-associated plant pathogenesis-related protein 1 and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials