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    TECPR1 tectonin beta-propeller repeat containing 1 [ Gallus gallus (chicken) ]

    Gene ID: 416436, updated on 14-Dec-2024

    Summary

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    Symbol
    TECPR1provided by CGNC
    Full Name
    tectonin beta-propeller repeat containing 1provided by CGNC
    Primary source
    CGNC:50257
    See related
    Ensembl:ENSGALG00010022021
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See TECPR1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (1121944..1147761, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (1120626..1146448, complement)

    Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112533468 Neighboring gene lemur tyrosine kinase 2 Neighboring gene basic helix-loop-helix family member a15 Neighboring gene brain protein I3 Neighboring gene BAI1 associated protein 2 like 1 Neighboring gene neuronal pentraxin 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tectonin beta-propeller repeat-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001396501.1 → NP_001383430.1  tectonin beta-propeller repeat-containing protein 1

      Status: VALIDATED

      Source sequence(s)
      BU138896, BU143243, BU307802, CR387218, CR523184, DR427452, HAEK01075720, JAENSK010000257
      UniProtKB/Swiss-Prot
      E1BZR9
      Related
      ENSGALP00010032253.1, ENSGALT00010053535.1
      Conserved Domains (4) summary
      smart00694
      Location:900 → 931
      DysFC; Dysferlin domain, C-terminal region
      smart00693
      Location:828 → 889
      DysFN; Dysferlin domain, N-terminal region
      smart00706
      Location:329 → 363
      TECPR; Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins
      cd13300
      Location:616 → 736
      PH1_TECPR1; Tectonin beta-propeller repeat-containing protein 1 Pleckstrin homology (PH) domain, repeat 1

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      1121944..1147761 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046900594.1 → XP_046756550.1  tectonin beta-propeller repeat-containing protein 1 isoform X1

      UniProtKB/Swiss-Prot
      E1BZR9
      UniProtKB/TrEMBL
      A0A8V0ZNI6

    2. XM_046900595.1 → XP_046756551.1  tectonin beta-propeller repeat-containing protein 1 isoform X4

      UniProtKB/Swiss-Prot
      E1BZR9
      UniProtKB/TrEMBL
      A0A8V0ZLD6
      Related
      ENSGALP00010032252.1, ENSGALT00010053531.1

    3. XM_015294267.4 → XP_015149753.2  tectonin beta-propeller repeat-containing protein 1 isoform X3

      UniProtKB/Swiss-Prot
      E1BZR9
      UniProtKB/TrEMBL
      A0A8V0ZG14
      Related
      ENSGALP00010032250.1, ENSGALT00010053527.1
      Conserved Domains (4) summary
      smart00694
      Location:900 → 928
      DysFC; Dysferlin domain, C-terminal region
      smart00693
      Location:828 → 889
      DysFN; Dysferlin domain, N-terminal region
      smart00706
      Location:329 → 363
      TECPR; Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins
      cd13300
      Location:616 → 736
      PH1_TECPR1; Tectonin beta-propeller repeat-containing protein 1 Pleckstrin homology (PH) domain, repeat 1

    4. XM_025155314.3 → XP_025011082.2  tectonin beta-propeller repeat-containing protein 1 isoform X2

      UniProtKB/Swiss-Prot
      E1BZR9
      Conserved Domains (4) summary
      smart00694
      Location:900 → 931
      DysFC; Dysferlin domain, C-terminal region
      smart00693
      Location:828 → 889
      DysFN; Dysferlin domain, N-terminal region
      smart00706
      Location:329 → 363
      TECPR; Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins
      cd13300
      Location:616 → 736
      PH1_TECPR1; Tectonin beta-propeller repeat-containing protein 1 Pleckstrin homology (PH) domain, repeat 1

    5. XM_046900593.1 → XP_046756549.1  tectonin beta-propeller repeat-containing protein 1 isoform X1

      UniProtKB/Swiss-Prot
      E1BZR9
      UniProtKB/TrEMBL
      A0A8V0ZNI6

    6. XM_040647641.2 → XP_040503575.1  tectonin beta-propeller repeat-containing protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZN54
      Conserved Domains (4) summary
      smart00694
      Location:900 → 928
      DysFC; Dysferlin domain, C-terminal region
      smart00693
      Location:828 → 889
      DysFN; Dysferlin domain, N-terminal region
      smart00706
      Location:329 → 363
      TECPR; Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins
      cd13300
      Location:616 → 736
      PH1_TECPR1; Tectonin beta-propeller repeat-containing protein 1 Pleckstrin homology (PH) domain, repeat 1

    7. XM_015294269.4 → XP_015149755.2  tectonin beta-propeller repeat-containing protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0ZN54
      Conserved Domains (4) summary
      smart00694
      Location:900 → 929
      DysFC; Dysferlin domain, C-terminal region
      smart00693
      Location:828 → 889
      DysFN; Dysferlin domain, N-terminal region
      smart00706
      Location:329 → 363
      TECPR; Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins
      cd13300
      Location:616 → 736
      PH1_TECPR1; Tectonin beta-propeller repeat-containing protein 1 Pleckstrin homology (PH) domain, repeat 1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1120626..1146448 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046927332.1 → XP_046783288.1  tectonin beta-propeller repeat-containing protein 1 isoform X1

      UniProtKB/Swiss-Prot
      E1BZR9

    2. XM_046927333.1 → XP_046783289.1  tectonin beta-propeller repeat-containing protein 1 isoform X4

      UniProtKB/Swiss-Prot
      E1BZR9

    3. XM_040683817.2 → XP_040539751.1  tectonin beta-propeller repeat-containing protein 1 isoform X3

      UniProtKB/Swiss-Prot
      E1BZR9
      Conserved Domains (4) summary
      smart00694
      Location:900 → 928
      DysFC; Dysferlin domain, C-terminal region
      smart00693
      Location:828 → 889
      DysFN; Dysferlin domain, N-terminal region
      smart00706
      Location:329 → 363
      TECPR; Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins
      cd13300
      Location:616 → 736
      PH1_TECPR1; Tectonin beta-propeller repeat-containing protein 1 Pleckstrin homology (PH) domain, repeat 1

    4. XM_040683816.2 → XP_040539750.1  tectonin beta-propeller repeat-containing protein 1 isoform X2

      UniProtKB/Swiss-Prot
      E1BZR9
      Conserved Domains (4) summary
      smart00694
      Location:900 → 931
      DysFC; Dysferlin domain, C-terminal region
      smart00693
      Location:828 → 889
      DysFN; Dysferlin domain, N-terminal region
      smart00706
      Location:329 → 363
      TECPR; Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins
      cd13300
      Location:616 → 736
      PH1_TECPR1; Tectonin beta-propeller repeat-containing protein 1 Pleckstrin homology (PH) domain, repeat 1

    5. XM_046927331.1 → XP_046783287.1  tectonin beta-propeller repeat-containing protein 1 isoform X1

      UniProtKB/Swiss-Prot
      E1BZR9

    6. XM_040683820.2 → XP_040539754.1  tectonin beta-propeller repeat-containing protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZN54
      Conserved Domains (4) summary
      smart00694
      Location:900 → 928
      DysFC; Dysferlin domain, C-terminal region
      smart00693
      Location:828 → 889
      DysFN; Dysferlin domain, N-terminal region
      smart00706
      Location:329 → 363
      TECPR; Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins
      cd13300
      Location:616 → 736
      PH1_TECPR1; Tectonin beta-propeller repeat-containing protein 1 Pleckstrin homology (PH) domain, repeat 1

    7. XM_040683819.2 → XP_040539753.1  tectonin beta-propeller repeat-containing protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0ZN54
      Conserved Domains (4) summary
      smart00694
      Location:900 → 929
      DysFC; Dysferlin domain, C-terminal region
      smart00693
      Location:828 → 889
      DysFN; Dysferlin domain, N-terminal region
      smart00706
      Location:329 → 363
      TECPR; Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins
      cd13300
      Location:616 → 736
      PH1_TECPR1; Tectonin beta-propeller repeat-containing protein 1 Pleckstrin homology (PH) domain, repeat 1
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    E1BZR9.1 GenPept UniProtKB/Swiss-Prot:E1BZR9

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