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    PANK2 pantothenate kinase 2 [ Gallus gallus (chicken) ]

    Gene ID: 422935, updated on 17-Aug-2024

    Summary

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    Symbol
    PANK2provided by CGNC
    Full Name
    pantothenate kinase 2provided by CGNC
    Primary source
    CGNC:11929
    See related
    Ensembl:ENSGALG00010016464
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See PANK2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (88115593..88125010, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (87918952..87928363, complement)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110621 Neighboring gene ring finger protein 24 Neighboring gene microRNA 103a-2 Neighboring gene mitochondrial antiviral signaling protein Neighboring gene protein tyrosine phosphatase, receptor type A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pantothenate kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in coenzyme A biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pantothenate kinase 2, mitochondrial
    Names
    pantothenate kinase 2 (Hallervorden-Spatz syndrome)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      88115593..88125010 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_420873.8 → XP_420873.3  pantothenate kinase 2, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z2T1
      Related
      ENSGALP00010022912.1, ENSGALT00010039653.1
      Conserved Domains (1) summary
      pfam03630
      Location:68 → 416
      Fumble; Fumble

    2. XM_025149859.3 → XP_025005627.1  pantothenate kinase 2, mitochondrial isoform X2

      Conserved Domains (1) summary
      pfam03630
      Location:3 → 235
      Fumble

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      87918952..87928363 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040670349.2 → XP_040526283.1  pantothenate kinase 2, mitochondrial isoform X1

      Conserved Domains (1) summary
      TIGR00555
      Location:66 → 419
      panK_eukar; pantothenate kinase, eukaryotic/staphyloccocal type

    2. XM_040670350.2 → XP_040526284.1  pantothenate kinase 2, mitochondrial isoform X2

      Conserved Domains (1) summary
      pfam03630
      Location:3 → 235
      Fumble
    Nucleotide Protein Strain
    Heading Accession and Version

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