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    ECPAS Ecm29 proteasome adaptor and scaffold [ Gallus gallus (chicken) ]

    Gene ID: 427336, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ECPASprovided by CGNC
    Official Full Name
    Ecm29 proteasome adaptor and scaffoldprovided by CGNC
    Primary source
    CGNC:11702
    See related
    Ensembl:ENSGALG00010006287
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    KIAA0368
    Orthologs
    human mouse all
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    Genomic context

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    See ECPAS in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    49
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (67093132..67152478)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (67093132..67152478)

    Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene G protein subunit gamma 10 Neighboring gene DnaJ heat shock protein family (Hsp40) member C25 Neighboring gene uncharacterized LOC121108562 Neighboring gene microRNA 1452 Neighboring gene microRNA 1459 Neighboring gene structural maintenance of chromosomes 2 Neighboring gene Prostaglandin reductase 1 Neighboring gene E3 ubiquitin-protein ligase Topors-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables molecular adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteasome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proteasome adapter and scaffold protein ECM29

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001389451.2 → NP_001376380.2  proteasome adapter and scaffold protein ECM29

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000095
      UniProtKB/TrEMBL
      A0A8V0XKW3
      Related
      ENSGALP00010008827.1, ENSGALT00010014999.1
      Conserved Domains (1) summary
      sd00044
      Location:1086 → 1109
      HEAT; HEAT repeat [structural motif]

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      67093132..67152478
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      67093132..67152478
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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    Research Materials