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    ATP2A3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [ Gallus gallus (chicken) ]

    Gene ID: 395707, updated on 3-Dec-2024

    Summary

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    Symbol
    ATP2A3provided by CGNC
    Full Name
    ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3provided by CGNC
    Primary source
    CGNC:1084
    See related
    Ensembl:ENSGALG00010029576
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    SERCA
    Orthologs
    human mouse all
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    Genomic context

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    See ATP2A3 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (3759270..3795957)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (3487913..3524487)

    Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene cytochrome b5 domain containing 2 Neighboring gene microRNA 6592 Neighboring gene zinc finger ZZ-type and EF-hand domain containing 1 Neighboring gene purinergic receptor P2X 1 Neighboring gene calcium/calmodulin dependent protein kinase kinase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A developmental profile of the levels of calcium pumps in chick cerebellum. Sepúlveda MR, et al. J Neurochem, 2005 Nov. PMID 16104848
    2. Identification of avian sarcoplasmic reticulum Ca(2+)-ATPase (SERCA3) as a novel 1,25(OH)(2)D(3) target gene in the monocytic lineage. Machuca I, et al. Exp Cell Res, 1999 Aug 1. PMID 10413590
    3. Transcriptome analysis for the chicken based on 19,626 finished cDNA sequences and 485,337 expressed sequence tags. Hubbard SJ, et al. Genome Res, 2005 Jan. PMID 15590942, Free PMC Article
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables P-type calcium transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular calcium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sarcoplasmic/endoplasmic reticulum calcium ATPase 3
    Names
    ATPase, Ca++ transporting, ubiquitous
    SERCA3
    SR Ca(2+)-ATPase 3
    calcium pump 3
    chkSERCA3
    sarcoendoplasmic reticulum calcium ATPase
    NP_990222.1
    XP_015151158.3
    XP_046758247.1
    XP_046785864.1
    XP_046785865.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_204891.2 → NP_990222.1  sarcoplasmic/endoplasmic reticulum calcium ATPase 3

      See identical proteins and their annotated locations for NP_990222.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000323
      UniProtKB/TrEMBL
      A0A8V1AMS2
      Related
      ENSGALP00010044182.1, ENSGALT00010071492.1
      Conserved Domains (6) summary
      TIGR01116
      Location:53 → 989
      ATPase-IIA1_Ca; sarco/endoplasmic reticulum calcium-translocating P-type ATPase
      pfam00122
      Location:92 → 340
      E1-E2_ATPase; E1-E2 ATPase
      pfam00689
      Location:784 → 987
      Cation_ATPase_C; Cation transporting ATPase, C-terminus
      pfam00690
      Location:4 → 72
      Cation_ATPase_N; Cation transporter/ATPase, N-terminus
      pfam12710
      Location:604 → 712
      HAD; haloacid dehalogenase-like hydrolase
      pfam13246
      Location:419 → 528
      Cation_ATPase; Cation transport ATPase (P-type)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      3759270..3795957
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015295672.4 → XP_015151158.3  sarcoplasmic/endoplasmic reticulum calcium ATPase 3 isoform X1

      UniProtKB/Swiss-Prot
      Q9YGL9
      UniProtKB/TrEMBL
      A0A8V1AMS2
      Related
      ENSGALP00010044181.1, ENSGALT00010071491.1
      Conserved Domains (1) summary
      cd02083
      Location:5 → 989
      P-type_ATPase_SERCA; sarco/endoplasmic reticulum Ca(2+)-ATPase (SERCA), similar to mammalian ATP2A1-3/SERCA1-3

    2. XM_046902291.1 → XP_046758247.1  sarcoplasmic/endoplasmic reticulum calcium ATPase 3 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AMS2

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      3487913..3524487
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046929908.1 → XP_046785864.1  sarcoplasmic/endoplasmic reticulum calcium ATPase 3 isoform X1

      UniProtKB/Swiss-Prot
      Q9YGL9
      UniProtKB/TrEMBL
      A0A8V1AMS2
      Conserved Domains (1) summary
      cd02083
      Location:5 → 989
      P-type_ATPase_SERCA; sarco/endoplasmic reticulum Ca(2+)-ATPase (SERCA), similar to mammalian ATP2A1-3/SERCA1-3

    2. XM_046929909.1 → XP_046785865.1  sarcoplasmic/endoplasmic reticulum calcium ATPase 3 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AMS2
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9YGL9.2 GenPept UniProtKB/Swiss-Prot:Q9YGL9

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials