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    STMN1 stathmin 1 [ Gallus gallus (chicken) ]

    Gene ID: 396057, updated on 3-Dec-2024

    Summary

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    Symbol
    STMN1provided by CGNC
    Full Name
    stathmin 1provided by CGNC
    Primary source
    CGNC:49630
    See related
    Ensembl:ENSGALG00010013517
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    LAP18
    Orthologs
    human mouse all
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    Genomic context

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    See STMN1 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 23 NC_052554.1 (3606078..3610419)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 23 NC_052595.1 (3372762..3377104)

    Chromosome 23 - NC_052554.1Genomic Context describing neighboring genes Neighboring gene exostosin like glycosyltransferase 1 Neighboring gene platelet activating factor acetylhydrolase 2 Neighboring gene progestin and adipoQ receptor family member 7 Neighboring gene gap junction protein alpha 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and characterization of transcripts present at elevated levels in the undifferentiated chick retina. Godbout R. Exp Eye Res, 1993 Jan. PMID 7916696
    2. Genetic variation among chicken lines and mammalian species in specific genes. Zhou H, et al. Poult Sci, 2001 Mar. PMID 11261557
    3. Conserved BK channel-protein interactions reveal signals relevant to cell death and survival. Sokolowski B, et al. PLoS One, 2011. PMID 22174833, Free PMC Article
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables tubulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule depolymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron projection development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of microtubule polymerization or depolymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    stathmin
    Names
    leukemia-associated phosphoprotein p18
    stathmin 1/oncoprotein 18

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001001858.2 → NP_001001858.1  stathmin

      See identical proteins and their annotated locations for NP_001001858.1

      Status: PROVISIONAL

      Source sequence(s)
      X67840
      UniProtKB/Swiss-Prot
      P31395
      UniProtKB/TrEMBL
      A0A8V0YMW1
      Conserved Domains (1) summary
      pfam00836
      Location:5 → 140
      Stathmin; Stathmin family

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052554.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      3606078..3610419
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015297603.4 → XP_015153089.1  stathmin isoform X1

      UniProtKB/Swiss-Prot
      P31395
      UniProtKB/TrEMBL
      A0A8V0YMW1
      Related
      ENSGALP00010019267.1, ENSGALT00010032526.1
      Conserved Domains (1) summary
      pfam00836
      Location:5 → 140
      Stathmin; Stathmin family

    2. XM_040651632.2 → XP_040507566.1  stathmin isoform X1

      UniProtKB/Swiss-Prot
      P31395
      UniProtKB/TrEMBL
      A0A8V0YMW1
      Conserved Domains (1) summary
      pfam00836
      Location:5 → 140
      Stathmin; Stathmin family

    3. XM_015297606.4 → XP_015153092.1  stathmin isoform X1

      UniProtKB/Swiss-Prot
      P31395
      UniProtKB/TrEMBL
      A0A8V0YMW1
      Conserved Domains (1) summary
      pfam00836
      Location:5 → 140
      Stathmin; Stathmin family

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052595.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      3372762..3377104
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046931860.1 → XP_046787816.1  stathmin isoform X1

      UniProtKB/Swiss-Prot
      P31395
      UniProtKB/TrEMBL
      A0A8V0YMW1

    2. XM_046931862.1 → XP_046787818.1  stathmin isoform X1

      UniProtKB/Swiss-Prot
      P31395
      UniProtKB/TrEMBL
      A0A8V0YMW1

    3. XM_046931861.1 → XP_046787817.1  stathmin isoform X1

      UniProtKB/Swiss-Prot
      P31395
      UniProtKB/TrEMBL
      A0A8V0YMW1
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P31395.1 GenPept UniProtKB/Swiss-Prot:P31395

    Gene LinkOut

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