WDR48 WD repeat domain 48 [Gallus gallus (chicken)] - Gene

Summary

Symbol: WDR48provided by CGNC
Full Name: WD repeat domain 48provided by CGNC
Primary source: CGNC:4538
See related: Ensembl:ENSGALG00010026715
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as: UAF1
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 2

Exon count:: 19

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	2	NC_052533.1 (5290667..5314083, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	2	NC_052574.1 (5293343..5316766, complement)

Chromosome 2 - NC_052533.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Results indicate that the USP1/UAF1 complex promotes homologous recombination, at least in part by suppressing nonhomologous end-joining.
Title: The USP1/UAF1 complex promotes double-strand break repair through homologous recombination.

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ubiquitin binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in double-strand break repair via homologous recombination	IEA Inferred from Electronic Annotation more info	PubMed
involved_in protein deubiquitination	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: WD repeat-containing protein 48

Names: USP1-associated factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001030964.2 → NP_001026135.1 WD repeat-containing protein 48

See identical proteins and their annotated locations for NP_001026135.1

Status: PROVISIONAL

Source sequence(s)

JAENSK010000035

UniProtKB/Swiss-Prot

Q5F3K4

UniProtKB/TrEMBL

A0A8V1ADR5

Related

ENSGALP00010039641.1, ENSGALT00010064852.1

Conserved Domains (3) summary

cd00200
Location:30 → 286

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

sd00039
Location:35 → 73

7WD40; WD40 repeat [structural motif]

pfam11816
Location:510 → 674

DUF3337; Domain of unknown function (DUF3337)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

5290667..5314083 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)