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    CRCP CGRP receptor component [ Gallus gallus (chicken) ]

    Gene ID: 396022, updated on 3-Dec-2024

    Summary

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    Official Symbol
    CRCPprovided by CGNC
    Official Full Name
    CGRP receptor componentprovided by CGNC
    Primary source
    CGNC:49611
    See related
    Ensembl:ENSGALG00010029668
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    RCP9
    Orthologs
    human mouse all
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    Genomic context

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    See CRCP in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (5420079..5473880)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (5156248..5210019)

    Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene vitamin K epoxide reductase complex subunit 1 like 1 Neighboring gene glucuronidase beta Neighboring gene tyrosylprotein sulfotransferase 1 Neighboring gene argininosuccinate lyase Neighboring gene argininosuccinate lyase 1 Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene uncharacterized LOC124417311 Neighboring gene potassium channel tetramerization domain containing 7 Neighboring gene RAB guanine nucleotide exchange factor 1 Neighboring gene transmembrane protein 248 Neighboring gene microRNA 6585

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of terminally differentiated cell state by categorizing cDNA clones derived from chicken lens fibers. Sawada K, et al. Int J Dev Biol, 1996 Jun. PMID 8840185
    2. ESTs from brain and testis of White Leghorn and red junglefowl: annotation, bioinformatic classification of unknown transcripts and analysis of expression levels. Savolainen P, et al. Cytogenet Genome Res, 2005. PMID 16093725
    3. Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index. Carre W, et al. Physiol Genomics, 2006 May 16. PMID 16554550
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transcription initiation at RNA polymerase III promoter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase III complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-directed RNA polymerase III subunit RPC9
    Names
    calcitonin gene-related peptide-receptor component protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001293292.2 → NP_001280221.1  DNA-directed RNA polymerase III subunit RPC9 isoform a

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000323
      UniProtKB/TrEMBL
      A0A8V1ALK0
      Related
      ENSGALP00010044439.1, ENSGALT00010071749.1
      Conserved Domains (1) summary
      smart00657
      Location:1 → 125
      RPOL4c; DNA-directed RNA-polymerase II subunit

    2. NM_001293293.2 → NP_001280222.1  DNA-directed RNA polymerase III subunit RPC9 isoform b

      See identical proteins and their annotated locations for NP_001280222.1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000323
      UniProtKB/TrEMBL
      A0A1D5NX38
      Conserved Domains (1) summary
      cl00638
      Location:1 → 80
      RNA_pol_Rpb4; RNA polymerase Rpb4

    3. NM_001293295.2 → NP_001280224.1  DNA-directed RNA polymerase III subunit RPC9 isoform b

      See identical proteins and their annotated locations for NP_001280224.1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000323
      UniProtKB/TrEMBL
      A0A1D5NX38
      Conserved Domains (1) summary
      cl00638
      Location:1 → 80
      RNA_pol_Rpb4; RNA polymerase Rpb4

    4. NM_001397816.1 → NP_001384745.1  DNA-directed RNA polymerase III subunit RPC9 isoform c

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000323
      UniProtKB/TrEMBL
      A0A8V1AEI4, A0A8V1APQ6
      Conserved Domains (1) summary
      smart00657
      Location:33 → 152
      RPOL4c; DNA-directed RNA-polymerase II subunit

    5. NM_001397817.1 → NP_001384746.1  DNA-directed RNA polymerase III subunit RPC9 isoform c

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000323
      UniProtKB/TrEMBL
      A0A8V1AEI4, A0A8V1APQ6
      Related
      ENSGALP00010044436.1, ENSGALT00010071746.1
      Conserved Domains (1) summary
      smart00657
      Location:33 → 152
      RPOL4c; DNA-directed RNA-polymerase II subunit

    6. NM_001397818.1 → NP_001384747.1  DNA-directed RNA polymerase III subunit RPC9 isoform b

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000323
      Conserved Domains (1) summary
      cl00638
      Location:1 → 80
      RNA_pol_Rpb4; RNA polymerase Rpb4

    7. NM_001397819.1 → NP_001384748.1  DNA-directed RNA polymerase III subunit RPC9 isoform b

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000323
      Conserved Domains (1) summary
      cl00638
      Location:1 → 80
      RNA_pol_Rpb4; RNA polymerase Rpb4

    8. NM_001397820.1 → NP_001384749.1  DNA-directed RNA polymerase III subunit RPC9 isoform b

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000323
      Conserved Domains (1) summary
      cl00638
      Location:1 → 80
      RNA_pol_Rpb4; RNA polymerase Rpb4

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      5420079..5473880
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040650024.2 → XP_040505958.1  DNA-directed RNA polymerase III subunit RPC9 isoform X4

      UniProtKB/TrEMBL
      A0A8V1AJW4, A0A8V1ALK0
      Related
      ENSGALP00010044443.1, ENSGALT00010071753.1
      Conserved Domains (1) summary
      smart00657
      Location:8 → 127
      RPOL4c; DNA-directed RNA-polymerase II subunit

    2. XM_015295677.4 → XP_015151163.2  DNA-directed RNA polymerase III subunit RPC9 isoform X3

      UniProtKB/TrEMBL
      A0A8V1APQ6
      Conserved Domains (1) summary
      smart00657
      Location:35 → 156
      RPOL4c; DNA-directed RNA-polymerase II subunit

    3. XM_046902294.1 → XP_046758250.1  DNA-directed RNA polymerase III subunit RPC9 isoform X1

      UniProtKB/TrEMBL
      A0A8V1AN96
      Related
      ENSGALP00010044444.1, ENSGALT00010071754.1

    4. XM_040650025.1 → XP_040505959.1  DNA-directed RNA polymerase III subunit RPC9 isoform X2

      Conserved Domains (1) summary
      smart00657
      Location:11 → 121
      RPOL4c; DNA-directed RNA-polymerase II subunit

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      5156248..5210019
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046929914.1 → XP_046785870.1  DNA-directed RNA polymerase III subunit RPC9 isoform X6

      UniProtKB/TrEMBL
      A0A8V1ALK0

    2. XM_046929916.1 → XP_046785872.1  DNA-directed RNA polymerase III subunit RPC9 isoform X7

    3. XM_046929913.1 → XP_046785869.1  DNA-directed RNA polymerase III subunit RPC9 isoform X5

      UniProtKB/TrEMBL
      A0A8V1APQ6

    4. XM_046929912.1 → XP_046785868.1  DNA-directed RNA polymerase III subunit RPC9 isoform X1

      UniProtKB/TrEMBL
      A0A8V1AN96

    5. XM_046929915.1 → XP_046785871.1  DNA-directed RNA polymerase III subunit RPC9 isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

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