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    CSNK1A1 casein kinase 1 alpha 1 [ Gallus gallus (chicken) ]

    Gene ID: 395924, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CSNK1A1provided by CGNC
    Official Full Name
    casein kinase 1 alpha 1provided by CGNC
    Primary source
    CGNC:49554
    See related
    Ensembl:ENSGALG00010011991
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    CSNK1A1L
    Orthologs
    human mouse all
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    Genomic context

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    See CSNK1A1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 13 NC_052544.1 (8069109..8102875)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 13 NC_052585.1 (8074620..8107985)

    Chromosome 13 - NC_052544.1Genomic Context describing neighboring genes Neighboring gene PPARG coactivator 1 beta Neighboring gene Rho guanine nucleotide exchange factor 37 Neighboring gene uncharacterized LOC112533410 Neighboring gene microRNA mir-145 Neighboring gene microRNA mir-143

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of four alternatively spliced isoforms of chicken casein kinase I alpha that are all expressed in diverse cell types. Green CL, et al. Gene, 1998 Aug 17. PMID 9766967
    2. Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index. Carre W, et al. Physiol Genomics, 2006 May 16. PMID 16554550
    3. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
    4. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in peptidyl-serine phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    casein kinase I isoform alpha; casein kinase I
    Names
    CK1
    CKI-alpha
    casein kinase 1 alpha 1 like
    casein kinase I alpha LS
    NP_990384.1
    XP_015149158.1
    XP_015149159.1
    XP_015149160.1
    XP_046782801.1
    XP_046782802.1
    XP_046782803.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_205053.2 → NP_990384.1  casein kinase I isoform alpha

      See identical proteins and their annotated locations for NP_990384.1

      Status: VALIDATED

      Source sequence(s)
      AF042863, AJ446617, AJ728829, AJ728830, AJ728831, AL584120, BI067393, BU284176, CB016751, CR387289, U80822
      UniProtKB/TrEMBL
      F1NL64
      Related
      ENSGALP00010016506.1, ENSGALT00010028703.1
      Conserved Domains (1) summary
      cd14128
      Location:16 → 309
      STKc_CK1_alpha; Catalytic domain of the Serine/Threonine protein kinases, Casein Kinase 1 alpha

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      8069109..8102875
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015293672.4 → XP_015149158.1  casein kinase I isoform X1

      UniProtKB/Swiss-Prot
      P67962
      UniProtKB/TrEMBL
      F1NL64
      Conserved Domains (1) summary
      cd14128
      Location:16 → 309
      STKc_CK1_alpha; Catalytic domain of the Serine/Threonine protein kinases, Casein Kinase 1 alpha

    2. XM_015293673.4 → XP_015149159.1  casein kinase I isoform X2

      UniProtKB/Swiss-Prot
      P67962
      Conserved Domains (1) summary
      cd14128
      Location:16 → 281
      STKc_CK1_alpha; Catalytic domain of the Serine/Threonine protein kinases, Casein Kinase 1 alpha

    3. XM_015293674.4 → XP_015149160.1  casein kinase I isoform X3

      UniProtKB/TrEMBL
      Q71UZ3
      Related
      ENSGALP00010016517.1, ENSGALT00010028715.1
      Conserved Domains (1) summary
      cd14128
      Location:16 → 281
      STKc_CK1_alpha; Catalytic domain of the Serine/Threonine protein kinases, Casein Kinase 1 alpha

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      8074620..8107985
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046926845.1 → XP_046782801.1  casein kinase I isoform X1

    2. XM_046926846.1 → XP_046782802.1  casein kinase I isoform X2

      UniProtKB/Swiss-Prot
      P67962

    3. XM_046926847.1 → XP_046782803.1  casein kinase I isoform X3

      UniProtKB/TrEMBL
      Q71UZ3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P67962.1 GenPept UniProtKB/Swiss-Prot:P67962

    Gene LinkOut

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