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    SPC25 SPC25, NDC80 kinetochore complex component [ Gallus gallus (chicken) ]

    Gene ID: 424172, updated on 3-Dec-2024

    Summary

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    Symbol
    SPC25provided by CGNC
    Full Name
    SPC25, NDC80 kinetochore complex componentprovided by CGNC
    Primary source
    CGNC:8282
    See related
    Ensembl:ENSGALG00010025380
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    SPBC25
    Orthologs
    human mouse all
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    Genomic context

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    See SPC25 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 7 NC_052538.1 (18550098..18553518)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 7 NC_052579.1 (18467364..18470784)

    Chromosome 7 - NC_052538.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily B member 11 Neighboring gene uncharacterized LOC121111322 Neighboring gene glucose-6-phosphatase catalytic subunit 2 Neighboring gene ceramide synthase 6 Neighboring gene microRNA 1733 Neighboring gene uncharacterized LOC107053827

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The functional region of CENP-H interacts with the Nuf2 complex that localizes to centromere during mitosis. Mikami Y, et al. Mol Cell Biol, 2005 Mar. PMID 15713649, Free PMC Article
    2. ESTs from brain and testis of White Leghorn and red junglefowl: annotation, bioinformatic classification of unknown transcripts and analysis of expression levels. Savolainen P, et al. Cytogenet Genome Res, 2005. PMID 16093725
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in chromosome segregation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Ndc80 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    kinetochore protein Spc25
    Names
    SPC25, NDC80 kinetochore complex component, homolog
    spindle pole body component 25 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001277857.2 → NP_001264786.1  kinetochore protein Spc25

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000236
      UniProtKB/TrEMBL
      A0A8V1A2P8
      Related
      ENSGALP00010038276.1, ENSGALT00010061981.1
      Conserved Domains (1) summary
      pfam08234
      Location:156 → 225
      Spindle_Spc25; Chromosome segregation protein Spc25

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052538.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      18550098..18553518
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025152194.3 → XP_025007962.1  kinetochore protein Spc25 isoform X1

      UniProtKB/TrEMBL
      A0A8V1A2P8
      Conserved Domains (2) summary
      pfam08234
      Location:158 → 192
      Spindle_Spc25; Chromosome segregation protein Spc25
      cl25732
      Location:14 → 138
      SMC_N; RecF/RecN/SMC N terminal domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052579.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      18467364..18470784
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046921399.1 → XP_046777355.1  kinetochore protein Spc25 isoform X1

      UniProtKB/TrEMBL
      A0A8V1A2P8
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials