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    SLC10A4 solute carrier family 10 member 4 [ Gallus gallus (chicken) ]

    Gene ID: 770263, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC10A4provided by CGNC
    Official Full Name
    solute carrier family 10 member 4provided by CGNC
    Primary source
    CGNC:55895
    See related
    Ensembl:ENSGALG00010016674
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See SLC10A4 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (65963528..65965188, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (65947635..65949301, complement)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene FRY like transcription coactivator Neighboring gene uncharacterized LOC121110764 Neighboring gene uncharacterized LOC107053243 Neighboring gene zygote arrest 1 Neighboring gene SLAIN motif family member 2 Neighboring gene tec protein tyrosine kinase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables bile acid:sodium symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in bile acid and bile salt transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium/bile acid cotransporter 4
    Names
    solute carrier family 10 (sodium/bile acid cotransporter family), member 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      65963528..65965188 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001233593.7 → XP_001233594.2  sodium/bile acid cotransporter 4

      UniProtKB/TrEMBL
      A0A1D5PPR5
      Related
      ENSGALP00010023366.1, ENSGALT00010040295.1
      Conserved Domains (1) summary
      cl19217
      Location:30 → 315
      SBF; Sodium Bile acid symporter family

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      65947635..65949301 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040671631.2 → XP_040527565.1  sodium/bile acid cotransporter 4

      UniProtKB/TrEMBL
      A0A1D5PPR5
      Conserved Domains (1) summary
      cl19217
      Location:30 → 315
      SBF; Sodium Bile acid symporter family
    Nucleotide Protein
    Heading Accession and Version

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