ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif 13 [Gallus gallus (chicken)] - Gene

Summary

Symbol: ADAMTS13provided by CGNC
Full Name: ADAM metallopeptidase with thrombospondin type 1 motif 13provided by CGNC
Primary source: CGNC:16490
See related: Ensembl:ENSGALG00010028869
Gene type: protein coding
RefSeq status: MODEL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 17

Exon count:: 32

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	17	NC_052548.1 (7511633..7531962)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	17	NC_052589.1 (6923283..6943607)

Chromosome 17 - NC_052548.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables metalloendopeptidase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in extracellular matrix organization	IEA Inferred from Electronic Annotation more info	PubMed
involved_in proteolysis	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in extracellular matrix	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: A disintegrin and metalloproteinase with thrombospondin motifs 13

Names: a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 13

XP_040505337.1

EC 3.4.24.87

XP_040505338.1

EC 3.4.24.87

XP_040505339.1

EC 3.4.24.87

XP_040505340.1

EC 3.4.24.87

XP_040542017.1

EC 3.4.24.87

XP_040542018.1

EC 3.4.24.87

XP_040542019.1

EC 3.4.24.87

XP_040542020.1

EC 3.4.24.87

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

7511633..7531962

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_040649406.1 → XP_040505340.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X4

UniProtKB/TrEMBL

A0A8V1AK33

Conserved Domains (3) summary

smart00209
Location:335 → 377

TSP1; Thrombospondin type 1 repeats

cd04273
Location:24 → 226

ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...

pfam05986
Location:496 → 618

ADAM_spacer1; ADAM-TS Spacer 1
XM_040649403.2 → XP_040505337.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1

UniProtKB/TrEMBL

A0A8V1AFS9, A0A8V1AK33

Related

ENSGALP00010042956.1, ENSGALT00010069830.1

Conserved Domains (3) summary

smart00209
Location:516 → 558

TSP1; Thrombospondin type 1 repeats

cd04273
Location:205 → 407

ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...

pfam05986
Location:677 → 799

ADAM_spacer1; ADAM-TS Spacer 1
XM_040649404.2 → XP_040505338.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X2

UniProtKB/TrEMBL

A0A8V1AK33

Conserved Domains (3) summary

smart00209
Location:516 → 558

TSP1; Thrombospondin type 1 repeats

cd04273
Location:205 → 407

ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...

pfam05986
Location:677 → 799

ADAM_spacer1; ADAM-TS Spacer 1
XM_040649405.2 → XP_040505339.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X3

UniProtKB/TrEMBL

A0A8V1AK33

Conserved Domains (3) summary

smart00209
Location:515 → 557

TSP1; Thrombospondin type 1 repeats

cd04273
Location:204 → 406

ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...

pfam05986
Location:676 → 798

ADAM_spacer1; ADAM-TS Spacer 1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

6923283..6943607

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_040686086.1 → XP_040542020.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X5

UniProtKB/TrEMBL

A0A8V1AK33

Conserved Domains (3) summary

smart00209
Location:413 → 455

TSP1; Thrombospondin type 1 repeats

cd04273
Location:102 → 304

ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...

pfam05986
Location:574 → 696

ADAM_spacer1; ADAM-TS Spacer 1
XM_040686083.2 → XP_040542017.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1

UniProtKB/TrEMBL

A0A8V1AK33

Conserved Domains (3) summary

smart00209
Location:516 → 558

TSP1; Thrombospondin type 1 repeats

cd04273
Location:205 → 407

ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...

pfam05986
Location:677 → 799

ADAM_spacer1; ADAM-TS Spacer 1
XM_040686084.2 → XP_040542018.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X2

UniProtKB/TrEMBL

A0A8V1AK33

Conserved Domains (3) summary

smart00209
Location:516 → 558

TSP1; Thrombospondin type 1 repeats

cd04273
Location:205 → 407

ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...

pfam05986
Location:677 → 799

ADAM_spacer1; ADAM-TS Spacer 1
XM_040686085.2 → XP_040542019.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X3

UniProtKB/TrEMBL

A0A8V1AK33

Conserved Domains (3) summary

smart00209
Location:515 → 557

TSP1; Thrombospondin type 1 repeats

cd04273
Location:204 → 406

ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...

pfam05986
Location:676 → 798

ADAM_spacer1; ADAM-TS Spacer 1