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    UXS1 UDP-glucuronate decarboxylase 1 [ Gallus gallus (chicken) ]

    Gene ID: 418728, updated on 17-Aug-2024

    Summary

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    Official Symbol
    UXS1provided by CGNC
    Official Full Name
    UDP-glucuronate decarboxylase 1provided by CGNC
    Primary source
    CGNC:12603
    See related
    Ensembl:ENSGALG00010015124
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See UXS1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (135539922..135595183, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (135497192..135552448, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121106671 Neighboring gene uncharacterized LOC107051985 Neighboring gene C2orf40 homolog Neighboring gene uncharacterized LOC112531517 Neighboring gene uncharacterized LOC107051990

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD+ binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables UDP-glucuronate decarboxylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in D-xylose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    UDP-glucuronic acid decarboxylase 1
    XP_015133409.1
    XP_025002423.1
    XP_040514065.1
    XP_040514066.1
    XP_040514067.1
    XP_416926.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      135539922..135595183 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015277923.4 → XP_015133409.1  UDP-glucuronic acid decarboxylase 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YSY0
      Conserved Domains (2) summary
      cd05230
      Location:73 → 340
      UGD_SDR_e; UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs
      pfam11803
      Location:7 → 72
      UXS1_N; UDP-glucuronate decarboxylase N-terminal

    2. XM_416926.8 → XP_416926.1  UDP-glucuronic acid decarboxylase 1 isoform X1

      See identical proteins and their annotated locations for XP_416926.1

      UniProtKB/TrEMBL
      A0A8V0YSY0, E1BV28
      Related
      ENSGALP00010021201.1, ENSGALT00010036436.1
      Conserved Domains (2) summary
      cd05230
      Location:90 → 393
      UGD_SDR_e; UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs
      pfam11803
      Location:7 → 79
      UXS1_N; UDP-glucuronate decarboxylase N-terminal

    3. XM_025146655.2 → XP_025002423.1  UDP-glucuronic acid decarboxylase 1 isoform X3

      Conserved Domains (1) summary
      cl21454
      Location:1 → 224
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      135497192..135552448 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040658132.2 → XP_040514066.1  UDP-glucuronic acid decarboxylase 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YSY0
      Conserved Domains (2) summary
      cd05230
      Location:73 → 340
      UGD_SDR_e; UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs
      pfam11803
      Location:7 → 72
      UXS1_N; UDP-glucuronate decarboxylase N-terminal

    2. XM_040658131.2 → XP_040514065.1  UDP-glucuronic acid decarboxylase 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YSY0, E1BV28
      Conserved Domains (2) summary
      cd05230
      Location:90 → 393
      UGD_SDR_e; UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs
      pfam11803
      Location:7 → 79
      UXS1_N; UDP-glucuronate decarboxylase N-terminal

    3. XM_040658133.1 → XP_040514067.1  UDP-glucuronic acid decarboxylase 1 isoform X3

      Conserved Domains (1) summary
      cl21454
      Location:1 → 224
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    Nucleotide Protein
    Heading Accession and Version

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