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    GCC2 GRIP and coiled-coil domain containing 2 [ Gallus gallus (chicken) ]

    Gene ID: 428014, updated on 3-Dec-2024

    Summary

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    Symbol
    GCC2provided by CGNC
    Full Name
    GRIP and coiled-coil domain containing 2provided by CGNC
    Primary source
    CGNC:12608
    See related
    Ensembl:ENSGALG00010015201
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See GCC2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (136294446..136323151)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (136252360..136281471)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121109029 Neighboring gene sulfotransferase family 1C member 3 Neighboring gene LIM zinc finger domain containing 1 Neighboring gene E3 SUMO-protein ligase RanBP2-like Neighboring gene uncharacterized LOC107051983

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in late endosome to Golgi transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GRIP and coiled-coil domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      136294446..136323151
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046906410.1 → XP_046762366.1  GRIP and coiled-coil domain-containing protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YKB0

    2. XM_004938522.5 → XP_004938579.2  GRIP and coiled-coil domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YKB0, A0A8V0YYG0
      Related
      ENSGALP00010021368.1, ENSGALT00010036636.1
      Conserved Domains (4) summary
      smart00755
      Location:1622 → 1667
      Grip; golgin-97, RanBP2alpha,Imh1p and p230/golgin-245
      COG1196
      Location:409 → 1199
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:69 → 700
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam16704
      Location:1557 → 1621
      Rab_bind; Rab binding domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      136252360..136281471
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046909758.1 → XP_046765714.1  GRIP and coiled-coil domain-containing protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YKB0

    2. XM_040657628.2 → XP_040513562.1  GRIP and coiled-coil domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YKB0
      Conserved Domains (5) summary
      smart00755
      Location:1622 → 1667
      Grip; golgin-97, RanBP2alpha,Imh1p and p230/golgin-245
      COG1196
      Location:409 → 1199
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      PRK10929
      Location:1095 → 1481
      PRK10929; putative mechanosensitive channel protein; Provisional
      TIGR02168
      Location:102 → 501
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam16704
      Location:1557 → 1621
      Rab_bind; Rab binding domain
    Nucleotide Protein
    Heading Accession and Version

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