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    GXYLT1 glucoside xylosyltransferase 1 [ Gallus gallus (chicken) ]

    Gene ID: 417789, updated on 3-Dec-2024

    Summary

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    Symbol
    GXYLT1provided by CGNC
    Full Name
    glucoside xylosyltransferase 1provided by CGNC
    Primary source
    CGNC:7254
    See related
    Ensembl:ENSGALG00010002308
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    GLT8D3
    Orthologs
    human mouse all
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    Genomic context

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    See GXYLT1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (29606233..29637308, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (29943846..29974881, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene PDZ domain containing ring finger 4 Neighboring gene uncharacterized LOC121106847 Neighboring gene YY1 associated factor 2 Neighboring gene zinc finger CCHC-type and RNA binding motif containing 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-xylosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in O-glycan processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glucoside xylosyltransferase 1
    Names
    glycosyltransferase 8 domain containing 3
    glycosyltransferase 8 domain-containing protein 3
    NP_001025907.2
    XP_015136681.2
    XP_046763161.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030736.2 → NP_001025907.2  glucoside xylosyltransferase 1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000012
      UniProtKB/Swiss-Prot
      Q5ZKI6
      UniProtKB/TrEMBL
      A0A8V0XEP1
      Related
      ENSGALP00010003087.1, ENSGALT00010005233.1
      Conserved Domains (1) summary
      cd06430
      Location:109 → 410
      GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      29606233..29637308 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015281195.3 → XP_015136681.2  glucoside xylosyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      Q5ZKI6
      Conserved Domains (1) summary
      cd06430
      Location:78 → 379
      GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      29943846..29974881 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046907205.1 → XP_046763161.1  glucoside xylosyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      Q5ZKI6
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5ZKI6.1 GenPept UniProtKB/Swiss-Prot:Q5ZKI6

    Gene LinkOut

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    Research Materials