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    NONO non-POU domain containing, octamer-binding [ Gallus gallus (chicken) ]

    Gene ID: 428701, updated on 17-Aug-2024

    Summary

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    Symbol
    NONOprovided by CGNC
    Full Name
    non-POU domain containing, octamer-bindingprovided by CGNC
    Primary source
    CGNC:4102
    See related
    Ensembl:ENSGALG00010017010
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See NONO in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (2224491..2239518, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (2260937..2275959, complement)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene TATA-box binding protein associated factor 1 Neighboring gene RHOG family member 2 Neighboring gene uncharacterized LOC121110551 Neighboring gene zinc finger MYM-type containing 3 Neighboring gene gap junction alpha-3 protein-like Neighboring gene gap junction protein beta 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    non-POU domain-containing octamer-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001031532.2 → NP_001026703.1  non-POU domain-containing octamer-binding protein

      See identical proteins and their annotated locations for NP_001026703.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000071
      UniProtKB/TrEMBL
      Q5ZIZ5
      Conserved Domains (3) summary
      cd12946
      Location:219 → 311
      NOPS_p54nrb_PSF_PSPC1; NOPS domain, including C-terminal coiled-coil region, in p54nrb/PSF/PSPC1 family proteins
      cd12588
      Location:73 → 143
      RRM1_p54nrb; RNA recognition motif 1 (RRM1) found in vertebrate 54 kDa nuclear RNA- and DNA-binding protein (p54nrb)
      cl17169
      Location:149 → 228
      RRM_SF; RNA recognition motif (RRM) superfamily

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      2224491..2239518 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040699097.2 → XP_040555031.1  non-POU domain-containing octamer-binding protein isoform X4

      Conserved Domains (3) summary
      cd12946
      Location:210 → 302
      NOPS_p54nrb_PSF_PSPC1; NOPS domain, including C-terminal coiled-coil region, in p54nrb/PSF/PSPC1 family proteins
      cd12588
      Location:64 → 134
      RRM1_p54nrb; RNA recognition motif 1 (RRM1) found in vertebrate 54 kDa nuclear RNA- and DNA-binding protein (p54nrb)
      cl17169
      Location:140 → 219
      RRM_SF; RNA recognition motif (RRM) superfamily

    2. XM_015278313.4 → XP_015133799.1  non-POU domain-containing octamer-binding protein isoform X3

      UniProtKB/TrEMBL
      Q5ZIZ5
      Conserved Domains (3) summary
      cd12946
      Location:219 → 311
      NOPS_p54nrb_PSF_PSPC1; NOPS domain, including C-terminal coiled-coil region, in p54nrb/PSF/PSPC1 family proteins
      cd12588
      Location:73 → 143
      RRM1_p54nrb; RNA recognition motif 1 (RRM1) found in vertebrate 54 kDa nuclear RNA- and DNA-binding protein (p54nrb)
      cl17169
      Location:149 → 228
      RRM_SF; RNA recognition motif (RRM) superfamily

    3. XM_040699096.2 → XP_040555030.1  non-POU domain-containing octamer-binding protein isoform X3

      UniProtKB/TrEMBL
      Q5ZIZ5
      Conserved Domains (3) summary
      cd12946
      Location:219 → 311
      NOPS_p54nrb_PSF_PSPC1; NOPS domain, including C-terminal coiled-coil region, in p54nrb/PSF/PSPC1 family proteins
      cd12588
      Location:73 → 143
      RRM1_p54nrb; RNA recognition motif 1 (RRM1) found in vertebrate 54 kDa nuclear RNA- and DNA-binding protein (p54nrb)
      cl17169
      Location:149 → 228
      RRM_SF; RNA recognition motif (RRM) superfamily

    4. XM_015278311.4 → XP_015133797.1  non-POU domain-containing octamer-binding protein isoform X2

      Conserved Domains (3) summary
      cd12946
      Location:251 → 343
      NOPS_p54nrb_PSF_PSPC1; NOPS domain, including C-terminal coiled-coil region, in p54nrb/PSF/PSPC1 family proteins
      cd12588
      Location:105 → 175
      RRM1_p54nrb; RNA recognition motif 1 in vertebrate 54 kDa nuclear RNA- and DNA-binding protein (p54nrb)
      cl17169
      Location:181 → 260
      RRM_SF; RNA recognition motif (RRM) superfamily

    5. XM_015278310.4 → XP_015133796.1  non-POU domain-containing octamer-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A8V0YZ19
      Related
      ENSGALP00010024038.1, ENSGALT00010041087.1
      Conserved Domains (3) summary
      cd12946
      Location:260 → 352
      NOPS_p54nrb_PSF_PSPC1; NOPS domain, including C-terminal coiled-coil region, in p54nrb/PSF/PSPC1 family proteins
      cd12588
      Location:114 → 184
      RRM1_p54nrb; RNA recognition motif 1 in vertebrate 54 kDa nuclear RNA- and DNA-binding protein (p54nrb)
      cl17169
      Location:190 → 269
      RRM_SF; RNA recognition motif (RRM) superfamily

    6. XM_025149746.3 → XP_025005514.1  non-POU domain-containing octamer-binding protein isoform X4

      Conserved Domains (3) summary
      cd12946
      Location:210 → 302
      NOPS_p54nrb_PSF_PSPC1; NOPS domain, including C-terminal coiled-coil region, in p54nrb/PSF/PSPC1 family proteins
      cd12588
      Location:64 → 134
      RRM1_p54nrb; RNA recognition motif 1 (RRM1) found in vertebrate 54 kDa nuclear RNA- and DNA-binding protein (p54nrb)
      cl17169
      Location:140 → 219
      RRM_SF; RNA recognition motif (RRM) superfamily

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      2260937..2275959 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046916506.1 → XP_046772462.1  non-POU domain-containing octamer-binding protein isoform X4

    2. XM_046916504.1 → XP_046772460.1  non-POU domain-containing octamer-binding protein isoform X3

      UniProtKB/TrEMBL
      Q5ZIZ5

    3. XM_046916503.1 → XP_046772459.1  non-POU domain-containing octamer-binding protein isoform X3

      UniProtKB/TrEMBL
      Q5ZIZ5

    4. XM_046916502.1 → XP_046772458.1  non-POU domain-containing octamer-binding protein isoform X2

    5. XM_046916501.1 → XP_046772457.1  non-POU domain-containing octamer-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A8V0YZ19

    6. XM_046916505.1 → XP_046772461.1  non-POU domain-containing octamer-binding protein isoform X4

    Nucleotide Protein Strain
    Heading Accession and Version

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