U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PLEKHM1 pleckstrin homology and RUN domain containing M1 [ Gallus gallus (chicken) ]

    Gene ID: 419939, updated on 17-Aug-2024

    Summary

    Symbol
    PLEKHM1provided by CGNC
    Full Name
    pleckstrin homology and RUN domain containing M1provided by CGNC
    Primary source
    CGNC:51131
    See related
    Ensembl:ENSGALG00010026017
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    pleckhm1
    Annotation information
    Annotation category: suggests misassembly
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See PLEKHM1 in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 27 NC_052558.1 (1237919..1253007, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 27 NC_052599.1 (2456601..2471646, complement)

    Chromosome 27 - NC_052558.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 98 Neighboring gene Rho GTPase activating protein 27 Neighboring gene leucine-rich repeat-containing protein 37A-like Neighboring gene uncharacterized LOC121107702 Neighboring gene RAD52 motif containing 1

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    pleckstrin homology domain-containing family M member 1
    Names
    pleckstrin homology domain containing, family M (with RUN domain) member 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030924.2NP_001026095.1  pleckstrin homology domain-containing family M member 1

      See identical proteins and their annotated locations for NP_001026095.1

      Status: PROVISIONAL

      Source sequence(s)
      AJ719533
      UniProtKB/TrEMBL
      A0A8V1A7J0, Q5ZM51
      Related
      ENSGALP00010039184.1, ENSGALT00010063473.1
      Conserved Domains (5) summary
      cd13321
      Location:441572
      PH_PLEKHM1; Pleckstrin homology domain-containing family M member 1 Pleckstrin homology (PH) domain
      pfam00169
      Location:478568
      PH; PH domain
      pfam02759
      Location:47180
      RUN; RUN domain
      pfam13901
      Location:781975
      zf-RING_9; Putative zinc-RING and/or ribbon
      cl17171
      Location:621705
      PH-like; Pleckstrin homology-like domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052558.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      1237919..1253007 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052599.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      2456601..2471646 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)