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    DSEL dermatan sulfate epimerase like [ Gallus gallus (chicken) ]

    Gene ID: 421028, updated on 17-Aug-2024

    Summary

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    Symbol
    DSELprovided by CGNC
    Full Name
    dermatan sulfate epimerase likeprovided by CGNC
    Primary source
    CGNC:10307
    See related
    Ensembl:ENSGALG00010001463
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See DSEL in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (94277362..94286992)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (94355700..94365327)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene early response to neural induction ERNI Neighboring gene uncharacterized LOC107052682 Neighboring gene uncharacterized LOC107052686 Neighboring gene uncharacterized LOC121109729 Neighboring gene uncharacterized LOC121109730

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chondroitin-glucuronate 5-epimerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sulfotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chondroitin sulfate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in dermatan sulfate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dermatan-sulfate epimerase-like protein
    XP_004935280.2
    XP_040519906.1
    XP_040519908.1
    XP_040551582.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      94277362..94286992
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040695648.2 → XP_040551582.1  dermatan-sulfate epimerase-like protein

      UniProtKB/TrEMBL
      A0A8V0X5K6
      Related
      ENSGALP00010001821.1, ENSGALT00010003378.1

    2. XM_004935223.5 → XP_004935280.2  dermatan-sulfate epimerase-like protein

      UniProtKB/TrEMBL
      A0A8V0X5K6

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      94355700..94365327
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040663972.2 → XP_040519906.1  dermatan-sulfate epimerase-like protein

    2. XM_040663974.2 → XP_040519908.1  dermatan-sulfate epimerase-like protein

    Nucleotide Protein Strain
    Heading Accession and Version

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