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    MED27 mediator complex subunit 27 [ Gallus gallus (chicken) ]

    Gene ID: 417172, updated on 3-Dec-2024

    Summary

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    Symbol
    MED27provided by CGNC
    Full Name
    mediator complex subunit 27provided by CGNC
    Primary source
    CGNC:2693
    See related
    Ensembl:ENSGALG00010028438
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    CRSP8
    Orthologs
    human mouse all
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    Genomic context

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    See MED27 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 17 NC_052548.1 (6941595..7022472, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 17 NC_052589.1 (6353021..6434328, complement)

    Chromosome 17 - NC_052548.1Genomic Context describing neighboring genes Neighboring gene Rap guanine nucleotide exchange factor 1 Neighboring gene proline rich transmembrane protein 1B Neighboring gene uncharacterized LOC101751924 Neighboring gene netrin G2 Neighboring gene uncharacterized LOC107052210

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A set of testis-specific novel genes collected from a collection of Korean Native Chicken ESTs. Shin JH, et al. Anim Genet, 2005 Aug. PMID 16026346
    2. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mediator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mediator of RNA polymerase II transcription subunit 27
    Names
    cofactor required for Sp1 transcriptional activation, subunit 8, 34kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001277275.2 → NP_001264204.1  mediator of RNA polymerase II transcription subunit 27

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000308
      UniProtKB/TrEMBL
      A0A8V1AGC1
      Related
      ENSGALP00010042319.1, ENSGALT00010068877.1
      Conserved Domains (1) summary
      pfam11571
      Location:229 → 307
      Med27; Mediator complex subunit 27

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      6941595..7022472 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025156065.3 → XP_025011833.1  mediator of RNA polymerase II transcription subunit 27 isoform X1

      UniProtKB/TrEMBL
      A0A8V1A8N9
      Conserved Domains (1) summary
      pfam11571
      Location:229 → 284
      Med27; Mediator complex subunit 27

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      6353021..6434328 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046928925.1 → XP_046784881.1  mediator of RNA polymerase II transcription subunit 27 isoform X1

      UniProtKB/TrEMBL
      A0A8V1A8N9
    Nucleotide Protein Strain
    Heading Accession and Version

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