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    CARHSP1 calcium regulated heat stable protein 1 [ Gallus gallus (chicken) ]

    Gene ID: 416640, updated on 3-Dec-2024

    Summary

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    Symbol
    CARHSP1provided by CGNC
    Full Name
    calcium regulated heat stable protein 1provided by CGNC
    Primary source
    CGNC:5529
    See related
    Ensembl:ENSGALG00010017256
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See CARHSP1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (10036739..10063840)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (10033070..10060175)

    Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene skin secretory protein xP2 Neighboring gene ubiquitin specific peptidase 7 Neighboring gene lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog Neighboring gene transmembrane protein 186 Neighboring gene phosphomannomutase 2 Neighboring gene 4-aminobutyrate aminotransferase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA 3'-UTR binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of mRNA stability IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calcium-regulated heat-stable protein 1
    Names
    calcium regulated heat stable protein 1, 24kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      10036739..10063840
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040647497.2 → XP_040503431.1  calcium-regulated heat-stable protein 1

      UniProtKB/TrEMBL
      A0A3Q2TWK2, A0A3Q2UIH0
      Related
      ENSGALP00010024337.1, ENSGALT00010041599.1
      Conserved Domains (1) summary
      cd04458
      Location:68 → 133
      CSP_CDS; Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein. ...

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      10033070..10060175
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046927675.1 → XP_046783631.1  calcium-regulated heat-stable protein 1

      UniProtKB/TrEMBL
      A0A3Q2TWK2, A0A3Q2UIH0
    Nucleotide Protein Strain
    Heading Accession and Version

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