U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ZCCHC2 zinc finger CCHC-type containing 2 [ Gallus gallus (chicken) ]

    Gene ID: 420905, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ZCCHC2provided by CGNC
    Official Full Name
    zinc finger CCHC-type containing 2provided by CGNC
    Primary source
    CGNC:9762
    See related
    Ensembl:ENSGALG00010011963
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ZCCHC2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (67871307..67917687, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (67846158..67892556, complement)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene PH domain and leucine rich repeat protein phosphatase 1 Neighboring gene uncharacterized LOC107052630 Neighboring gene uncharacterized LOC121109722 Neighboring gene TNF receptor superfamily member 11a

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    zinc finger CCHC domain-containing protein 2
    Names
    zinc finger, CCHC domain containing 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      67871307..67917687 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040695600.2 → XP_040551534.1  zinc finger CCHC domain-containing protein 2 isoform X5

      UniProtKB/TrEMBL
      A0A8V0YD77
      Conserved Domains (3) summary
      PTZ00368
      Location:1136 → 1159
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      PHA03247
      Location:736 → 956
      PHA03247; large tegument protein UL36; Provisional
      cl15755
      Location:540 → 596
      SAM_superfamily; SAM (Sterile alpha motif )

    2. XM_015282201.4 → XP_015137687.2  zinc finger CCHC domain-containing protein 2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YK71
      Conserved Domains (3) summary
      PTZ00368
      Location:1101 → 1124
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      PHA03247
      Location:701 → 921
      PHA03247; large tegument protein UL36; Provisional
      cl15755
      Location:505 → 561
      SAM_superfamily; SAM (Sterile alpha motif )

    3. XM_015282200.4 → XP_015137686.2  zinc finger CCHC domain-containing protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YK71
      Related
      ENSGALP00010016459.1, ENSGALT00010028645.1
      Conserved Domains (3) summary
      PTZ00368
      Location:1102 → 1125
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      PHA03247
      Location:702 → 922
      PHA03247; large tegument protein UL36; Provisional
      cl15755
      Location:506 → 562
      SAM_superfamily; SAM (Sterile alpha motif )

    4. XM_015282199.3 → XP_015137685.2  zinc finger CCHC domain-containing protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YD77
      Conserved Domains (3) summary
      PTZ00368
      Location:1129 → 1152
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      PHA03247
      Location:729 → 949
      PHA03247; large tegument protein UL36; Provisional
      cl15755
      Location:533 → 589
      SAM_superfamily; SAM (Sterile alpha motif )

    5. XM_025147680.3 → XP_025003448.2  zinc finger CCHC domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YD77
      Related
      ENSGALP00010016450.1, ENSGALT00010028634.1
      Conserved Domains (3) summary
      PTZ00368
      Location:1130 → 1153
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      PHA03247
      Location:730 → 950
      PHA03247; large tegument protein UL36; Provisional
      cl15755
      Location:534 → 590
      SAM_superfamily; SAM (Sterile alpha motif )

    6. XM_040695601.2 → XP_040551535.1  zinc finger CCHC domain-containing protein 2 isoform X6

      UniProtKB/TrEMBL
      A0A8V0YD77
      Conserved Domains (3) summary
      PTZ00368
      Location:1135 → 1158
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      PHA03247
      Location:735 → 955
      PHA03247; large tegument protein UL36; Provisional
      cl15755
      Location:539 → 595
      SAM_superfamily; SAM (Sterile alpha motif )

    7. XM_040695599.2 → XP_040551533.1  zinc finger CCHC domain-containing protein 2 isoform X5

      UniProtKB/TrEMBL
      A0A8V0YD77
      Conserved Domains (3) summary
      PTZ00368
      Location:1136 → 1159
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      PHA03247
      Location:736 → 956
      PHA03247; large tegument protein UL36; Provisional
      cl15755
      Location:540 → 596
      SAM_superfamily; SAM (Sterile alpha motif )

    RNA

    1. XR_005857389.2 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      67846158..67892556 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040663928.2 → XP_040519862.1  zinc finger CCHC domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YD77
      Conserved Domains (3) summary
      PTZ00368
      Location:1128 → 1151
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      PHA03247
      Location:728 → 948
      PHA03247; large tegument protein UL36; Provisional
      cl15755
      Location:532 → 588
      SAM_superfamily; SAM (Sterile alpha motif )

    2. XM_040663931.2 → XP_040519865.1  zinc finger CCHC domain-containing protein 2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YK71
      Conserved Domains (3) summary
      PTZ00368
      Location:1099 → 1122
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      PHA03247
      Location:699 → 919
      PHA03247; large tegument protein UL36; Provisional
      cl15755
      Location:503 → 559
      SAM_superfamily; SAM (Sterile alpha motif )

    3. XM_040663930.2 → XP_040519864.1  zinc finger CCHC domain-containing protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YK71
      Conserved Domains (3) summary
      PTZ00368
      Location:1100 → 1123
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      PHA03247
      Location:700 → 920
      PHA03247; large tegument protein UL36; Provisional
      cl15755
      Location:504 → 560
      SAM_superfamily; SAM (Sterile alpha motif )

    4. XM_040663929.2 → XP_040519863.1  zinc finger CCHC domain-containing protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YD77
      Conserved Domains (3) summary
      PTZ00368
      Location:1127 → 1150
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      PHA03247
      Location:727 → 947
      PHA03247; large tegument protein UL36; Provisional
      cl15755
      Location:531 → 587
      SAM_superfamily; SAM (Sterile alpha motif )

    5. XM_040663927.2 → XP_040519861.1  zinc finger CCHC domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YD77
      Conserved Domains (3) summary
      PTZ00368
      Location:1128 → 1151
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      PHA03247
      Location:728 → 948
      PHA03247; large tegument protein UL36; Provisional
      cl15755
      Location:532 → 588
      SAM_superfamily; SAM (Sterile alpha motif )

    RNA

    1. XR_005846512.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials