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    CCR7 C-C motif chemokine receptor 7 [ Gallus gallus (chicken) ]

    Gene ID: 428315, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CCR7provided by CGNC
    Official Full Name
    C-C motif chemokine receptor 7provided by CGNC
    Primary source
    CGNC:53333
    See related
    Ensembl:ENSGALG00010022529
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See CCR7 in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 27 NC_052558.1 (4466688..4475421, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 27 NC_052599.1 (5628852..5637581, complement)

    Chromosome 27 - NC_052558.1Genomic Context describing neighboring genes Neighboring gene insulin like growth factor binding protein 4 Neighboring gene tensin 4 Neighboring gene uncharacterized LOC107055315 Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 Neighboring gene uncharacterized LOC107055316 Neighboring gene keratin 222

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Chicken interleukin-21 is costimulatory for T cells and blocks maturation of dendritic cells. Rothwell L, et al. Dev Comp Immunol, 2012 Feb. PMID 21911004
    2. Chicken CCR6 and CCR7 are markers for immature and mature dendritic cells respectively. Wu Z, et al. Dev Comp Immunol, 2011 May. PMID 21195108
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables C-C motif chemokine 19 receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chemokine (C-C motif) ligand 19 binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chemokine (C-C motif) ligand 21 binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-C chemokine receptor type 7
    Names
    chemokine (C-C motif) receptor 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001198752.2 → NP_001185681.1  C-C chemokine receptor type 7 precursor

      See identical proteins and their annotated locations for NP_001185681.1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000365
      UniProtKB/TrEMBL
      E3VW39
      Related
      ENSGALP00010033143.1, ENSGALT00010054832.1
      Conserved Domains (2) summary
      pfam00001
      Location:73 → 322
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl22924
      Location:63 → 247
      7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052558.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      4466688..4475421 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052599.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      5628852..5637581 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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