U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ZFR2 zinc finger RNA binding protein 2 [ Gallus gallus (chicken) ]

    Gene ID: 427424, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Symbol
    ZFR2provided by CGNC
    Full Name
    zinc finger RNA binding protein 2provided by CGNC
    Primary source
    CGNC:53082
    See related
    Ensembl:ENSGALG00010014907
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    ZFR
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ZFR2 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (10305133..10346201, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (10305133..10346201, complement)

    Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene golgi phosphoprotein 3 Neighboring gene uncharacterized LOC107051928 Neighboring gene myotubularin related protein 12 Neighboring gene small nucleolar RNA SNORA66 Neighboring gene collagen alpha-1(XI) chain-like Neighboring gene SUB1 regulator of transcription Neighboring gene uncharacterized LOC121108605 Neighboring gene uncharacterized LOC101748116

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables double-stranded RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables single-stranded RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of precatalytic spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    zinc finger RNA-binding protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      10305133..10346201 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_424997.8 → XP_424997.3  zinc finger RNA-binding protein isoform X2

      UniProtKB/TrEMBL
      A0A8V0YFY9
      Conserved Domains (3) summary
      smart00572
      Location:777 → 1031
      DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
      smart00451
      Location:574 → 605
      ZnF_U1; U1-like zinc finger
      sd00020
      Location:577 → 599
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_004937169.5 → XP_004937226.2  zinc finger RNA-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A175KE36, A0A8V0YFY9, A0A8V0YRY6
      Related
      ENSGALP00010020819.1, ENSGALT00010035885.1
      Conserved Domains (3) summary
      smart00572
      Location:781 → 1035
      DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
      smart00451
      Location:578 → 609
      ZnF_U1; U1-like zinc finger
      sd00020
      Location:581 → 603
      ZF_C2H2; C2H2 Zn finger [structural motif]

    RNA

    1. XR_005843241.2 RNA Sequence

      Related
      ENSGALT00010035879.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      10305133..10346201 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046936325.1 → XP_046792281.1  zinc finger RNA-binding protein isoform X2

      UniProtKB/TrEMBL
      A0A8V0YFY9

    2. XM_046936324.1 → XP_046792280.1  zinc finger RNA-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A175KE36, A0A8V0YFY9, A0A8V0YRY6

    RNA

    1. XR_006937730.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials