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    TRIT1 tRNA isopentenyltransferase 1 [ Gallus gallus (chicken) ]

    Gene ID: 419678, updated on 3-Dec-2024

    Summary

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    Symbol
    TRIT1provided by CGNC
    Full Name
    tRNA isopentenyltransferase 1provided by CGNC
    Primary source
    CGNC:2820
    See related
    Ensembl:ENSGALG00010016534
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See TRIT1 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 23 NC_052554.1 (5879867..5894351, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 23 NC_052595.1 (5643185..5657637, complement)

    Chromosome 23 - NC_052554.1Genomic Context describing neighboring genes Neighboring gene 5'-nucleotidase, cytosolic IA Neighboring gene hippocalcin like 4 Neighboring gene protein FAM49A-like Neighboring gene v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog Neighboring gene major facilitator superfamily domain containing 2A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tRNA dimethylallyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA modification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA dimethylallyltransferase, mitochondrial; tRNA dimethylallyltransferase
    XP_004947943.3
    XP_040507785.1
    XP_040507786.2
    XP_040545857.1
    XP_040545858.2
    XP_040545859.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052554.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      5879867..5894351 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040651851.2 → XP_040507785.1  tRNA dimethylallyltransferase isoform X1

      Conserved Domains (1) summary
      cl40481
      Location:129 → 390
      YlqF_related_GTPase; Circularly permuted YlqF-related GTPases

    2. XM_040651852.2 → XP_040507786.2  tRNA dimethylallyltransferase isoform X3

      UniProtKB/TrEMBL
      E1C6R1

    3. XM_004947886.5 → XP_004947943.3  tRNA dimethylallyltransferase isoform X2

      UniProtKB/TrEMBL
      E1C6R1
      Related
      ENSGALP00010023041.1, ENSGALT00010039821.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052595.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      5643185..5657637 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040689923.1 → XP_040545857.1  tRNA dimethylallyltransferase isoform X1

      Conserved Domains (1) summary
      cl40481
      Location:129 → 390
      YlqF_related_GTPase; Circularly permuted YlqF-related GTPases

    2. XM_040689925.2 → XP_040545859.2  tRNA dimethylallyltransferase isoform X3

      UniProtKB/TrEMBL
      E1C6R1

    3. XM_040689924.2 → XP_040545858.2  tRNA dimethylallyltransferase isoform X2

      UniProtKB/TrEMBL
      E1C6R1
    Nucleotide Protein Strain
    Heading Accession and Version

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