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    EIF3B eukaryotic translation initiation factor 3 subunit B [ Gallus gallus (chicken) ]

    Gene ID: 769783, updated on 17-Aug-2024

    Summary

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    Official Symbol
    EIF3Bprovided by CGNC
    Official Full Name
    eukaryotic translation initiation factor 3 subunit Bprovided by CGNC
    Primary source
    CGNC:55528
    See related
    Ensembl:ENSGALG00010019991
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See EIF3B in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (3112857..3129103)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (3111035..3127286)

    Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene nudix hydrolase 1 Neighboring gene sorting nexin 8 Neighboring gene carbohydrate sulfotransferase 12 Neighboring gene orexin receptor type 2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation initiation factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translational initiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of eukaryotic translation initiation factor 3 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    eukaryotic translation initiation factor 3 subunit B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      3112857..3129103
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015294347.4 → XP_015149833.1  eukaryotic translation initiation factor 3 subunit B

      UniProtKB/TrEMBL
      A0A8V0ZC55
      Conserved Domains (3) summary
      COG5354
      Location:292 → 756
      COG5354; Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
      sd00039
      Location:360 → 407
      7WD40; WD40 repeat [structural motif]
      cd12278
      Location:168 → 248
      RRM_eIF3B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 3 subunit B (eIF-3B) and similar proteins

    2. XM_003642142.6 → XP_003642190.3  eukaryotic translation initiation factor 3 subunit B

      UniProtKB/TrEMBL
      A0A8V0ZC55
      Related
      ENSGALP00010028466.1, ENSGALT00010048277.1
      Conserved Domains (3) summary
      COG5354
      Location:292 → 756
      COG5354; Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
      sd00039
      Location:360 → 407
      7WD40; WD40 repeat [structural motif]
      cd12278
      Location:168 → 248
      RRM_eIF3B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 3 subunit B (eIF-3B) and similar proteins

    3. XM_046900994.1 → XP_046756950.1  eukaryotic translation initiation factor 3 subunit B

      UniProtKB/TrEMBL
      A0A8V0ZC55

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      3111035..3127286
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040684106.2 → XP_040540040.1  eukaryotic translation initiation factor 3 subunit B

      UniProtKB/TrEMBL
      A0A8V0ZC55
      Conserved Domains (3) summary
      COG5354
      Location:292 → 756
      COG5354; Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
      sd00039
      Location:360 → 407
      7WD40; WD40 repeat [structural motif]
      cd12278
      Location:168 → 248
      RRM_eIF3B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 3 subunit B (eIF-3B) and similar proteins

    2. XM_040684105.2 → XP_040540039.1  eukaryotic translation initiation factor 3 subunit B

      UniProtKB/TrEMBL
      A0A8V0ZC55
      Conserved Domains (3) summary
      COG5354
      Location:292 → 756
      COG5354; Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
      sd00039
      Location:360 → 407
      7WD40; WD40 repeat [structural motif]
      cd12278
      Location:168 → 248
      RRM_eIF3B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 3 subunit B (eIF-3B) and similar proteins

    3. XM_046927762.1 → XP_046783718.1  eukaryotic translation initiation factor 3 subunit B

      UniProtKB/TrEMBL
      A0A8V0ZC55
    Nucleotide Protein
    Heading Accession and Version

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