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    CHST12 carbohydrate sulfotransferase 12 [ Gallus gallus (chicken) ]

    Gene ID: 416469, updated on 3-Dec-2024

    Summary

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    Symbol
    CHST12provided by CGNC
    Full Name
    carbohydrate sulfotransferase 12provided by CGNC
    Primary source
    CGNC:3145
    See related
    Ensembl:ENSGALG00010020032
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See CHST12 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (3138295..3145413)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (3136478..3143600)

    Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene sorting nexin 8 Neighboring gene eukaryotic translation initiation factor 3 subunit B Neighboring gene orexin receptor type 2-like Neighboring gene uncharacterized LOC124417206 Neighboring gene galectin-related inter-fiber protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sulfotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteoglycan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    carbohydrate sulfotransferase 12
    Names
    carbohydrate (chondroitin 4) sulfotransferase 12
    XP_015149834.1
    XP_015149835.1
    XP_015149836.1
    XP_040503791.1
    XP_040503792.1
    XP_040540053.1
    XP_040540054.1
    XP_040540055.1
    XP_040540056.1
    XP_040540057.1
    XP_046756952.1
    XP_046783720.1
    XP_046783722.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      3138295..3145413
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015294349.4 → XP_015149835.1  carbohydrate sulfotransferase 12 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZBF5, E1BR90
      Related
      ENSGALP00010028534.1, ENSGALT00010048396.1
      Conserved Domains (1) summary
      pfam03567
      Location:176 → 421
      Sulfotransfer_2; Sulfotransferase family

    2. XM_015294350.4 → XP_015149836.1  carbohydrate sulfotransferase 12 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZBF5, E1BR90
      Related
      ENSGALP00010028539.1, ENSGALT00010048405.1
      Conserved Domains (1) summary
      pfam03567
      Location:176 → 421
      Sulfotransfer_2; Sulfotransferase family

    3. XM_015294348.4 → XP_015149834.1  carbohydrate sulfotransferase 12 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZBF5, E1BR90
      Related
      ENSGALP00010028535.1, ENSGALT00010048399.1
      Conserved Domains (1) summary
      pfam03567
      Location:176 → 421
      Sulfotransfer_2; Sulfotransferase family

    4. XM_040647857.2 → XP_040503791.1  carbohydrate sulfotransferase 12 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZBF5, E1BR90
      Related
      ENSGALP00010028530.1, ENSGALT00010048387.1
      Conserved Domains (1) summary
      pfam03567
      Location:176 → 421
      Sulfotransfer_2; Sulfotransferase family

    5. XM_040647858.2 → XP_040503792.1  carbohydrate sulfotransferase 12 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZBF5, E1BR90
      Related
      ENSGALP00010028528.1, ENSGALT00010048384.1
      Conserved Domains (1) summary
      pfam03567
      Location:176 → 421
      Sulfotransfer_2; Sulfotransferase family

    6. XM_046900996.1 → XP_046756952.1  carbohydrate sulfotransferase 12 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZBF5

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      3136478..3143600
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040684122.2 → XP_040540056.1  carbohydrate sulfotransferase 12 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZBF5, E1BR90
      Conserved Domains (1) summary
      pfam03567
      Location:176 → 421
      Sulfotransfer_2; Sulfotransferase family

    2. XM_040684123.2 → XP_040540057.1  carbohydrate sulfotransferase 12 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZBF5, E1BR90
      Conserved Domains (1) summary
      pfam03567
      Location:176 → 421
      Sulfotransfer_2; Sulfotransferase family

    3. XM_046927764.1 → XP_046783720.1  carbohydrate sulfotransferase 12 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZBF5

    4. XM_040684119.2 → XP_040540053.1  carbohydrate sulfotransferase 12 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZBF5, E1BR90
      Conserved Domains (1) summary
      pfam03567
      Location:176 → 421
      Sulfotransfer_2; Sulfotransferase family

    5. XM_040684120.2 → XP_040540054.1  carbohydrate sulfotransferase 12 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZBF5, E1BR90
      Conserved Domains (1) summary
      pfam03567
      Location:176 → 421
      Sulfotransfer_2; Sulfotransferase family

    6. XM_046927766.1 → XP_046783722.1  carbohydrate sulfotransferase 12 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZBF5, E1BR90

    7. XM_040684121.2 → XP_040540055.1  carbohydrate sulfotransferase 12 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZBF5, E1BR90
      Conserved Domains (1) summary
      pfam03567
      Location:176 → 421
      Sulfotransfer_2; Sulfotransferase family
    Nucleotide Protein
    Heading Accession and Version

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