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    LOC416924 thyroid adenoma-associated protein homolog [ Gallus gallus (chicken) ]

    Gene ID: 416924, updated on 17-Aug-2024

    Summary

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    Symbol
    LOC416924provided by CGNC
    Full Name
    thyroid adenoma-associated protein homologprovided by CGNC
    Primary source
    CGNC:50379
    See related
    Ensembl:ENSGALG00010023989
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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    Genomic context

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    See LOC416924 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (7855848..7866317, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (7866124..7876592, complement)

    Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene sushi domain containing 2 Neighboring gene WW domain-binding protein 11-like Neighboring gene somatomedin B and thrombospondin type 1 domain containing Neighboring gene microRNA mir-12228 Neighboring gene goosecoid homeobox 2 Neighboring gene DiGeorge syndrome critical region gene 14 Neighboring gene DiGeorge syndrome critical region gene 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in tRNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    thyroid adenoma-associated protein homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      7855848..7866317 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015275471.4 → XP_015130957.2  thyroid adenoma-associated protein homolog isoform X4

      Conserved Domains (1) summary
      cl19897
      Location:950 → 1305
      DUF2428; Putative death-receptor fusion protein (DUF2428)

    2. XM_015275469.4 → XP_015130955.2  thyroid adenoma-associated protein homolog isoform X2

      UniProtKB/TrEMBL
      A0A8V1A2N0
      Related
      ENSGALP00010035498.1, ENSGALT00010058418.1
      Conserved Domains (1) summary
      cl19897
      Location:978 → 1333
      DUF2428; Putative death-receptor fusion protein (DUF2428)

    3. XM_015275470.4 → XP_015130956.2  thyroid adenoma-associated protein homolog isoform X3

      Conserved Domains (1) summary
      cl19897
      Location:979 → 1334
      DUF2428; Putative death-receptor fusion protein (DUF2428)

    4. XM_040648107.2 → XP_040504041.1  thyroid adenoma-associated protein homolog isoform X1

      Conserved Domains (1) summary
      cl19897
      Location:979 → 1334
      DUF2428; Putative death-receptor fusion protein (DUF2428)

    5. XM_040648108.2 → XP_040504042.1  thyroid adenoma-associated protein homolog isoform X5

      Conserved Domains (1) summary
      cl19897
      Location:979 → 1334
      DUF2428; Putative death-receptor fusion protein (DUF2428)

    6. XM_040648110.2 → XP_040504044.1  thyroid adenoma-associated protein homolog isoform X7

      Conserved Domains (1) summary
      cl19897
      Location:979 → 1334
      DUF2428; Putative death-receptor fusion protein (DUF2428)

    7. XM_040648109.2 → XP_040504043.1  thyroid adenoma-associated protein homolog isoform X6

      Conserved Domains (1) summary
      cl19897
      Location:979 → 1334
      DUF2428; Putative death-receptor fusion protein (DUF2428)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      7866124..7876592 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046928390.1 → XP_046784346.1  thyroid adenoma-associated protein homolog isoform X4

    2. XM_046928388.1 → XP_046784344.1  thyroid adenoma-associated protein homolog isoform X2

    3. XM_046928389.1 → XP_046784345.1  thyroid adenoma-associated protein homolog isoform X3

    4. XM_046928387.1 → XP_046784343.1  thyroid adenoma-associated protein homolog isoform X1

    5. XM_040684761.2 → XP_040540695.1  thyroid adenoma-associated protein homolog isoform X7

      Conserved Domains (1) summary
      cl19897
      Location:979 → 1334
      DUF2428; Putative death-receptor fusion protein (DUF2428)

    6. XM_040684760.2 → XP_040540694.1  thyroid adenoma-associated protein homolog isoform X6

      Conserved Domains (1) summary
      cl19897
      Location:979 → 1334
      DUF2428; Putative death-receptor fusion protein (DUF2428)

    RNA

    1. XR_005854422.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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