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    LOC776719 V-type proton ATPase catalytic subunit A-like [ Gallus gallus (chicken) ]

    Gene ID: 776719, updated on 17-Aug-2024

    Summary

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    Symbol
    LOC776719provided by CGNC
    Full Name
    V-type proton ATPase catalytic subunit A-likeprovided by CGNC
    Primary source
    CGNC:58223
    See related
    Ensembl:ENSGALG00010028858
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    ATP6V1AL
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    Genomic context

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    See LOC776719 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 25 NC_052556.1 (2959593..2965597)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 25 NC_052597.1 (2998456..3004460)

    Chromosome 25 - NC_052556.1Genomic Context describing neighboring genes Neighboring gene death effector domain-containing protein Neighboring gene deaminated glutathione amidase-like Neighboring gene prefoldin subunit 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables proton-transporting ATPase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ATP metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in lysosomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of proton-transporting V-type ATPase, V1 domain IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    V-type proton ATPase catalytic subunit A-like
    Names
    ATPase H+ transporting V1 subunit A-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052556.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      2959593..2965597
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040652422.2 → XP_040508356.1  V-type proton ATPase catalytic subunit A-like isoform X2

      Conserved Domains (1) summary
      TIGR01042
      Location:114 → 581
      V-ATPase_V1_A; V-type (H+)-ATPase V1, A subunit

    2. XM_046904057.1 → XP_046760013.1  V-type proton ATPase catalytic subunit A-like isoform X2

    3. XM_025143435.3 → XP_024999203.1  V-type proton ATPase catalytic subunit A-like isoform X1

      UniProtKB/TrEMBL
      A0A8V1AEM2
      Related
      ENSGALP00010042933.1, ENSGALT00010069807.1
      Conserved Domains (1) summary
      TIGR01042
      Location:19 → 609
      V-ATPase_V1_A; V-type (H+)-ATPase V1, A subunit

    4. XM_040652423.2 → XP_040508357.1  V-type proton ATPase catalytic subunit A-like isoform X3

      UniProtKB/TrEMBL
      A0A8V1AK12
      Conserved Domains (1) summary
      TIGR01042
      Location:19 → 530
      V-ATPase_V1_A; V-type (H+)-ATPase V1, A subunit

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052597.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      2998456..3004460
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040691076.2 → XP_040547010.1  V-type proton ATPase catalytic subunit A-like isoform X2

      Conserved Domains (1) summary
      TIGR01042
      Location:114 → 581
      V-ATPase_V1_A; V-type (H+)-ATPase V1, A subunit

    2. XM_046932807.1 → XP_046788763.1  V-type proton ATPase catalytic subunit A-like isoform X2

    3. XM_040691075.2 → XP_040547009.1  V-type proton ATPase catalytic subunit A-like isoform X1

      UniProtKB/TrEMBL
      A0A8V1AEM2
      Conserved Domains (1) summary
      TIGR01042
      Location:19 → 609
      V-ATPase_V1_A; V-type (H+)-ATPase V1, A subunit

    4. XM_040691077.2 → XP_040547011.1  V-type proton ATPase catalytic subunit A-like isoform X3

      UniProtKB/TrEMBL
      A0A8V1AK12
      Conserved Domains (1) summary
      TIGR01042
      Location:19 → 530
      V-ATPase_V1_A; V-type (H+)-ATPase V1, A subunit
    Nucleotide Protein
    Heading Accession and Version

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