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    TRIM36 tripartite motif containing 36 [ Gallus gallus (chicken) ]

    Gene ID: 426811, updated on 3-Dec-2024

    Summary

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    Official Symbol
    TRIM36provided by CGNC
    Official Full Name
    tripartite motif containing 36provided by CGNC
    Primary source
    CGNC:6210
    See related
    Ensembl:ENSGALG00010001145
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See TRIM36 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (83455399..83481856, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (83455399..83481856, complement)

    Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene cyclin dependent kinase inhibitor 2B Neighboring gene uncharacterized LOC107052436 Neighboring gene protein geranylgeranyltransferase type I subunit beta Neighboring gene coiled-coil domain containing 112

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase TRIM36

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      83455399..83481856 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046905860.1 → XP_046761816.1  E3 ubiquitin-protein ligase TRIM36 isoform X3

      UniProtKB/TrEMBL
      A0A8V0X6V3

    2. XM_015280832.4 → XP_015136318.3  E3 ubiquitin-protein ligase TRIM36 isoform X2

      UniProtKB/TrEMBL
      A0A8V0X6V3

    3. XM_046905859.1 → XP_046761815.1  E3 ubiquitin-protein ligase TRIM36 isoform X1

      UniProtKB/TrEMBL
      A0A8V0X6V3

    4. XM_040656166.2 → XP_040512100.1  E3 ubiquitin-protein ligase TRIM36 isoform X5

      UniProtKB/TrEMBL
      A0A8V0X6V3
      Related
      ENSGALP00010001154.1, ENSGALT00010002604.1
      Conserved Domains (6) summary
      smart00502
      Location:244 → 368
      BBC; B-Box C-terminal domain
      cd00063
      Location:419 → 497
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd16756
      Location:16 → 113
      RING-HC_TRIM36; RING finger, HC subclass, found in tripartite motif-containing protein 36 (TRIM36) and similar proteins
      cd19778
      Location:198 → 242
      Bbox2_TRIM36_C-I; B-box-type 2 zinc finger found in tripartite motif-containing protein 36 (TRIM36) and similar proteins
      cl00034
      Location:144 → 192
      Bbox_SF; B-box-type zinc finger superfamily
      cl02614
      Location:505 → 713
      SPRY; SPRY domain

    5. XM_040656164.2 → XP_040512098.1  E3 ubiquitin-protein ligase TRIM36 isoform X4

      UniProtKB/TrEMBL
      A0A8V0X6V3, A0A8V0X9I0
      Related
      ENSGALP00010001153.1, ENSGALT00010002603.1
      Conserved Domains (6) summary
      smart00502
      Location:254 → 378
      BBC; B-Box C-terminal domain
      cd00063
      Location:429 → 507
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd16756
      Location:16 → 123
      RING-HC_TRIM36; RING finger, HC subclass, found in tripartite motif-containing protein 36 (TRIM36) and similar proteins
      cd19778
      Location:208 → 252
      Bbox2_TRIM36_C-I; B-box-type 2 zinc finger found in tripartite motif-containing protein 36 (TRIM36) and similar proteins
      cl00034
      Location:154 → 202
      Bbox_SF; B-box-type zinc finger superfamily
      cl02614
      Location:515 → 723
      SPRY; SPRY domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      83455399..83481856 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046936163.1 → XP_046792119.1  E3 ubiquitin-protein ligase TRIM36 isoform X3

      UniProtKB/TrEMBL
      A0A8V0X6V3

    2. XM_046936162.1 → XP_046792118.1  E3 ubiquitin-protein ligase TRIM36 isoform X2

      UniProtKB/TrEMBL
      A0A8V0X6V3

    3. XM_046936161.1 → XP_046792117.1  E3 ubiquitin-protein ligase TRIM36 isoform X1

      UniProtKB/TrEMBL
      A0A8V0X6V3

    4. XM_046936165.1 → XP_046792121.1  E3 ubiquitin-protein ligase TRIM36 isoform X5

      UniProtKB/TrEMBL
      A0A8V0X6V3

    5. XM_046936164.1 → XP_046792120.1  E3 ubiquitin-protein ligase TRIM36 isoform X4

      UniProtKB/TrEMBL
      A0A8V0X6V3, A0A8V0X9I0
    Nucleotide Protein Strain
    Heading Accession and Version

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