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    NEUROD6 neuronal differentiation 6 [ Gallus gallus (chicken) ]

    Gene ID: 420754, updated on 17-Aug-2024

    Summary

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    Symbol
    NEUROD6provided by CGNC
    Full Name
    neuronal differentiation 6provided by CGNC
    Primary source
    CGNC:9293
    See related
    Ensembl:ENSGALG00010019676
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See NEUROD6 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (48531580..48558714)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (48577604..48604796)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112531728 Neighboring gene protein phosphatase 1 regulatory subunit 17 Neighboring gene coiled-coil domain containing 129 Neighboring gene uncharacterized LOC121109979 Neighboring gene integrin subunit alpha 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    neurogenic differentiation factor 6
    Names
    neurogenic differentiation 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      48531580..48558714
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040695926.2 → XP_040551860.1  neurogenic differentiation factor 6

      UniProtKB/TrEMBL
      A0A3Q2U1V3
      Related
      ENSGALP00010028119.1, ENSGALT00010047486.1
      Conserved Domains (2) summary
      cd19722
      Location:82 → 151
      bHLH_TS_NeuroD6_ATOH2; basic helix-loop-helix (bHLH) domain found in neurogenic differentiation factor 6 (NeuroD6) and similar proteins
      pfam12533
      Location:153 → 272
      Neuro_bHLH; Neuronal helix-loop-helix transcription factor

    2. XM_025147557.3 → XP_025003325.1  neurogenic differentiation factor 6

      UniProtKB/TrEMBL
      A0A3Q2U1V3
      Conserved Domains (2) summary
      cd19722
      Location:82 → 151
      bHLH_TS_NeuroD6_ATOH2; basic helix-loop-helix (bHLH) domain found in neurogenic differentiation factor 6 (NeuroD6) and similar proteins
      pfam12533
      Location:153 → 272
      Neuro_bHLH; Neuronal helix-loop-helix transcription factor

    3. XM_025147558.3 → XP_025003326.1  neurogenic differentiation factor 6

      UniProtKB/TrEMBL
      A0A3Q2U1V3
      Related
      ENSGALP00010028115.1, ENSGALT00010047482.1
      Conserved Domains (2) summary
      cd19722
      Location:82 → 151
      bHLH_TS_NeuroD6_ATOH2; basic helix-loop-helix (bHLH) domain found in neurogenic differentiation factor 6 (NeuroD6) and similar proteins
      pfam12533
      Location:153 → 272
      Neuro_bHLH; Neuronal helix-loop-helix transcription factor

    4. XM_418852.8 → XP_418852.1  neurogenic differentiation factor 6

      See identical proteins and their annotated locations for XP_418852.1

      UniProtKB/TrEMBL
      A0A3Q2U1V3
      Related
      ENSGALP00010028114.1, ENSGALT00010047481.1
      Conserved Domains (2) summary
      cd19722
      Location:82 → 151
      bHLH_TS_NeuroD6_ATOH2; basic helix-loop-helix (bHLH) domain found in neurogenic differentiation factor 6 (NeuroD6) and similar proteins
      pfam12533
      Location:153 → 272
      Neuro_bHLH; Neuronal helix-loop-helix transcription factor

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      48577604..48604796
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040664596.2 → XP_040520530.1  neurogenic differentiation factor 6

      UniProtKB/TrEMBL
      A0A3Q2U1V3
      Conserved Domains (2) summary
      cd19722
      Location:82 → 151
      bHLH_TS_NeuroD6_ATOH2; basic helix-loop-helix (bHLH) domain found in neurogenic differentiation factor 6 (NeuroD6) and similar proteins
      pfam12533
      Location:153 → 272
      Neuro_bHLH; Neuronal helix-loop-helix transcription factor

    2. XM_040664595.2 → XP_040520529.1  neurogenic differentiation factor 6

      UniProtKB/TrEMBL
      A0A3Q2U1V3
      Conserved Domains (2) summary
      cd19722
      Location:82 → 151
      bHLH_TS_NeuroD6_ATOH2; basic helix-loop-helix (bHLH) domain found in neurogenic differentiation factor 6 (NeuroD6) and similar proteins
      pfam12533
      Location:153 → 272
      Neuro_bHLH; Neuronal helix-loop-helix transcription factor

    3. XM_040664597.2 → XP_040520531.1  neurogenic differentiation factor 6

      UniProtKB/TrEMBL
      A0A3Q2U1V3
      Conserved Domains (2) summary
      cd19722
      Location:82 → 151
      bHLH_TS_NeuroD6_ATOH2; basic helix-loop-helix (bHLH) domain found in neurogenic differentiation factor 6 (NeuroD6) and similar proteins
      pfam12533
      Location:153 → 272
      Neuro_bHLH; Neuronal helix-loop-helix transcription factor

    4. XM_040664594.2 → XP_040520528.1  neurogenic differentiation factor 6

      UniProtKB/TrEMBL
      A0A3Q2U1V3
      Conserved Domains (2) summary
      cd19722
      Location:82 → 151
      bHLH_TS_NeuroD6_ATOH2; basic helix-loop-helix (bHLH) domain found in neurogenic differentiation factor 6 (NeuroD6) and similar proteins
      pfam12533
      Location:153 → 272
      Neuro_bHLH; Neuronal helix-loop-helix transcription factor
    Nucleotide Protein
    Heading Accession and Version

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