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    TDRD7 tudor domain containing 7 [ Gallus gallus (chicken) ]

    Gene ID: 430492, updated on 3-Dec-2024

    Summary

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    Symbol
    TDRD7provided by CGNC
    Full Name
    tudor domain containing 7provided by CGNC
    Primary source
    CGNC:9379
    See related
    Ensembl:ENSGALG00010009635
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See TDRD7 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (71384963..71425558, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (71384963..71425558, complement)

    Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene microRNA 7438 Neighboring gene thiosulfate sulfurtransferase like domain containing 2 Neighboring gene tropomodulin 1 Neighboring gene uncharacterized LOC121108249 Neighboring gene diacylglycerol kinase theta Neighboring gene aconitase 1, soluble

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mutations in the RNA granule component TDRD7 cause cataract and glaucoma. Lachke SA, et al. Science, 2011 Mar 25. PMID 21436445, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in lens fiber cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lens morphogenesis in camera-type eye IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in spermatogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tudor domain-containing protein 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001305104.2 → NP_001292033.2  tudor domain-containing protein 7

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000096
      UniProtKB/TrEMBL
      A0A8V0YBH0
      Related
      ENSGALP00010013288.1, ENSGALT00010022988.1
      Conserved Domains (5) summary
      cd09973
      Location:238 → 305
      LOTUS_2_TDRD7; The second LOTUS domain on Tudor-containing protein 7 (TDRD7)
      cd09974
      Location:347 → 413
      LOTUS_3_TDRD7; The third LOTUS domain on Tudor-containing protein 7 (TDRD7)
      smart00333
      Location:517 → 570
      TUDOR; Tudor domain
      cl02573
      Location:709 → 759
      Tudor_SF; Tudor domain superfamily
      cl14879
      Location:5 → 90
      LabA_like_C; C-terminal domain of LabA_like proteins

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      71384963..71425558 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004949619.4 → XP_004949676.2  tudor domain-containing protein 7 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YBH5
      Conserved Domains (4) summary
      cd09973
      Location:98 → 165
      LOTUS_2_TDRD7; The second LOTUS domain on Tudor-containing protein 7 (TDRD7)
      cd09974
      Location:207 → 273
      LOTUS_3_TDRD7; The third LOTUS domain on Tudor-containing protein 7 (TDRD7)
      smart00333
      Location:377 → 430
      TUDOR; Tudor domain
      cl02573
      Location:569 → 619
      Tudor_SF; Tudor domain superfamily

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      71384963..71425558 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046935333.1 → XP_046791289.1  tudor domain-containing protein 7 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YBH5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    E1C3S7.1 GenPept UniProtKB/Swiss-Prot:E1C3S7

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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    Research Materials