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    SLC41A2 solute carrier family 41 member 2 [ Gallus gallus (chicken) ]

    Gene ID: 427913, updated on 3-Dec-2024

    Summary

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    Symbol
    SLC41A2provided by CGNC
    Full Name
    solute carrier family 41 member 2provided by CGNC
    Primary source
    CGNC:53224
    See related
    Ensembl:ENSGALG00010011671
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See SLC41A2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (54372130..54421390)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (54662816..54712020)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene aldehyde dehydrogenase 1 family member L2 Neighboring gene uncharacterized LOC112533513 Neighboring gene C12orf45 homolog Neighboring gene uncharacterized LOC121107115 Neighboring gene carbohydrate sulfotransferase 11 Neighboring gene uncharacterized LOC107049021

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SLC41A2 encodes a plasma-membrane Mg2+ transporter. Sahni J, et al. Biochem J, 2007 Jan 15. PMID 16984228, Free PMC Article
    2. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables monoatomic cation transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in monoatomic cation transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    solute carrier family 41 member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001031483.2 → NP_001026654.2  solute carrier family 41 member 2

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000012
      UniProtKB/TrEMBL
      A0A8V0YJ02, F1NWZ7
      Related
      ENSGALP00010016026.1, ENSGALT00010027932.1
      Conserved Domains (1) summary
      pfam01769
      Location:414 → 555
      MgtE; Divalent cation transporter

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      54372130..54421390
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046942916.1 → XP_046798872.1  solute carrier family 41 member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YJ02, F1NWZ7

    2. XM_015286032.4 → XP_015141518.1  solute carrier family 41 member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YJ02, F1NWZ7
      Related
      ENSGALP00010016023.1, ENSGALT00010027923.1
      Conserved Domains (1) summary
      pfam01769
      Location:414 → 555
      MgtE; Divalent cation transporter

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      54662816..54712020
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046908557.1 → XP_046764513.1  solute carrier family 41 member 2 isoform X1

      UniProtKB/Swiss-Prot
      Q5ZHX6
      UniProtKB/TrEMBL
      A0A8V0YJ02

    2. XM_046908556.1 → XP_046764512.1  solute carrier family 41 member 2 isoform X1

      UniProtKB/Swiss-Prot
      Q5ZHX6
      UniProtKB/TrEMBL
      A0A8V0YJ02
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5ZHX6.1 GenPept UniProtKB/Swiss-Prot:Q5ZHX6

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.