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    RFX6 regulatory factor X6 [ Gallus gallus (chicken) ]

    Gene ID: 421737, updated on 17-Aug-2024

    Summary

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    Symbol
    RFX6provided by CGNC
    Full Name
    regulatory factor X6provided by CGNC
    Primary source
    CGNC:11075
    See related
    Ensembl:ENSGALG00010012330
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    RFXDC1
    Orthologs
    human mouse all
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    Genomic context

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    See RFX6 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (63386819..63420627, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (63228873..63262683, complement)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110405 Neighboring gene uncharacterized LOC121110187 Neighboring gene G protein-coupled receptor class C group 6 member A Neighboring gene family with sequence similarity 162 member B Neighboring gene karyopherin subunit alpha 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-binding protein RFX6
    Names
    regulatory factor X domain containing 1
    regulatory factor X, 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      63386819..63420627 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015284589.4 → XP_015140075.2  DNA-binding protein RFX6 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YF66, A0A8V0YM32
      Related
      ENSGALP00010017158.1, ENSGALT00010029519.1

    2. XM_040697538.2 → XP_040553472.1  DNA-binding protein RFX6 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YM32

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      63228873..63262683 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040666654.2 → XP_040522588.1  DNA-binding protein RFX6 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YM32

    2. XM_040666653.2 → XP_040522587.1  DNA-binding protein RFX6 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YM32
    Nucleotide Protein
    Heading Accession and Version

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