These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001099681.2 → NP_001093151.2  PDZ domain-containing protein MAGIX isoform c

   Status: VALIDATED

   Description

   Transcript Variant: This variant (3) lacks an alternate in-frame exon, compared to variant 1. The resulting isoform (c) is shorter than isoform a.

   Source sequence(s)

   AC231657, AI369342, AK025340, BC067800

   Consensus CDS

   CCDS48107.1

   UniProtKB/TrEMBL

   A0A087WUY6

   Related

   ENSP00000479023.1, ENST00000615626.4

   Conserved Domains (1) summary

   cd00992
   Location:93 → 130

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

2. NM_001099682.2 → NP_001093152.2  PDZ domain-containing protein MAGIX isoform d

   Status: VALIDATED

   Description

   Transcript Variant: This variant (4) lacks an alternate in-frame exon and uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. The resulting isoform (d) is shorter than isoform a.

   Source sequence(s)

   AC231657, AK025340, BC027995

   Consensus CDS

   CCDS75976.1

   UniProtKB/TrEMBL

   A0A087X263

   Related

   ENSP00000484729.1, ENST00000614074.4

   Conserved Domains (1) summary

   cd00992
   Location:93 → 130

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

3. NM_001395401.1 → NP_001382330.1  PDZ domain-containing protein MAGIX isoform e

   Status: VALIDATED

   Source sequence(s)

   AC231657

   Consensus CDS

   CCDS94607.1

   UniProtKB/TrEMBL

   A0A087X1L4

   Related

   ENSP00000481198.1, ENST00000616266.4

   Conserved Domains (1) summary

   cd00992
   Location:65 → 147

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

4. NM_024859.4 → NP_079135.3  PDZ domain-containing protein MAGIX isoform a

   Status: VALIDATED

   Description

   Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a).

   Source sequence(s)

   AC231657

   Consensus CDS

   CCDS48106.1

   UniProtKB/Swiss-Prot

   A0A075B7A2, A6XND4, A8MSX9, B7WP26, Q14C81, Q9H6Y5

   Related

   ENSP00000471299.1, ENST00000595224.6

   Conserved Domains (1) summary

   cd00992
   Location:124 → 206

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference GRCh38.p14 Primary Assembly

Genomic

1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

   Range

   49162665..49168774

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

1. NW_025791820.1 Reference GRCh38.p14 PATCHES

   Range

   321616..327725

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

1. NC_060947.1 Alternate T2T-CHM13v2.0

   Range

   48574403..48580510

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

The following Reference Sequences have been suppressed. Explain

These RefSeqs were suppressed for the cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related sequence links, or BLAST links (BLink), but may still be retrieved by clicking on their accession.version below.

1. NM_001099680.1: Suppressed sequence

   Description

   NM_001099680.1: This RefSeq was temporarily suppressed because currently there is not sufficient data to support this transcript.