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    2310047D07Rik RIKEN cDNA 2310047D07 gene [ Mus musculus (house mouse) ]

    Gene ID: 69657, updated on 22-Oct-2024

    Summary

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    Official Symbol
    2310047D07Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 2310047D07 geneprovided by MGI
    Primary source
    MGI:MGI:1916907
    See related
    Ensembl:ENSMUSG00000120179 AllianceGenome:MGI:1916907
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See 2310047D07Rik in Genome Data Viewer
    Location:
    5 G3; 5 89.18 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (149165833..149174787)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (149228988..149237977)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene macrophage M2 polarization regulator Neighboring gene glucosamine-6-phosphate deaminase 1 pseudogene Neighboring gene ubiquitin specific peptidase like 1 Neighboring gene STARR-seq mESC enhancer starr_14930 Neighboring gene nuclear encoded tRNA asparagine 14 (anticodon GTT) Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:150057677-150057931 Neighboring gene predicted gene, 24105 Neighboring gene arachidonate 5-lipoxygenase activating protein Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:150115779-150116084 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:150123236-150123514 Neighboring gene predicted gene, 35620

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
    2. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
    3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      149165833..149174787
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_004942693.1 RNA Sequence

    2. XR_004942689.1 RNA Sequence

      Related
      ENSMUST00000261785.1

    3. XR_001785026.3 RNA Sequence

      Related
      ENSMUST00000189639.3

    4. XR_001785027.3 RNA Sequence

      Related
      ENSMUST00000261783.1

    5. XR_004942695.1 RNA Sequence

      Related
      ENSMUST00000242212.2

    6. XR_004942688.1 RNA Sequence

    7. XR_004942692.1 RNA Sequence

    8. XR_003956022.1 RNA Sequence

    9. XR_004942691.1 RNA Sequence

    10. XR_004942696.1 RNA Sequence

    11. XR_004942694.1 RNA Sequence

    12. XR_004942690.1 RNA Sequence

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NR_166364.1: Suppressed sequence

      Description
      NR_166364.1: This RefSeq was removed because currently there is insufficient support for the transcript.

    2. NR_166365.1: Suppressed sequence

      Description
      NR_166365.1: This RefSeq was removed because currently there is insufficient support for the transcript.
    Nucleotide Protein Strain
    Heading Accession and Version

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