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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001201372.2 → NP_001188301.1 coiled-coil domain-containing protein 136 isoform 2
See identical proteins and their annotated locations for NP_001188301.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) contains an alternate in-frame exon in the 5' coding region, uses an upstream start codon, and lacks nine exons in the 3' coding region, compared to variant 1. The resulting protein (isoform 2) is shorter and has a distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AI611323, AK124447, DR003042
- Consensus CDS
-
CCDS56510.1
- UniProtKB/Swiss-Prot
-
Q96JN2
- Related
- ENSP00000367956.4, ENST00000378685.8
- Conserved Domains (3) summary
-
- pfam07106
Location:144 → 243
- TBPIP; Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
- pfam15619
Location:110 → 292
- Lebercilin; Ciliary protein causing Leber congenital amaurosis disease
- cl21455
Location:314 → 390
- P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
-
NM_001363423.2 → NP_001350352.1 coiled-coil domain-containing protein 136 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AK023500, AK124447, AL042602, DA511054, DB050791, DB078673, DR003042
- Conserved Domains (2) summary
-
- cl25732
Location:84 → 451
- SMC_N; RecF/RecN/SMC N terminal domain
- cl28204
Location:509 → 792
- GlgA; Glycogen synthase [Carbohydrate transport and metabolism]
-
NM_001363424.2 → NP_001350353.1 coiled-coil domain-containing protein 136 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AK023500, AK124447, DA511054, DB050791, DR003042
- Conserved Domains (2) summary
-
- cl25732
Location:103 → 394
- SMC_N; RecF/RecN/SMC N terminal domain
- cl28204
Location:497 → 780
- GlgA; Glycogen synthase [Carbohydrate transport and metabolism]
-
NM_001367761.1 → NP_001354690.1 coiled-coil domain-containing protein 136 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC024952, AC025594
- Consensus CDS
-
CCDS94193.1
- UniProtKB/TrEMBL
-
C9JU31
- Related
- ENSP00000419515.1, ENST00000464832.5
-
NM_001367762.1 → NP_001354691.1 coiled-coil domain-containing protein 136 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC024952, AC025594
-
NM_001367763.1 → NP_001354692.1 coiled-coil domain-containing protein 136 isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC024952, AC025594
-
NM_001367764.1 → NP_001354693.1 coiled-coil domain-containing protein 136 isoform 8
Status: VALIDATED
- Source sequence(s)
-
AC024952, AC025594
- UniProtKB/TrEMBL
-
H7C4R2
- Related
- ENSP00000417931.1, ENST00000494552.5
-
NM_001367765.1 → NP_001354694.1 coiled-coil domain-containing protein 136 isoform 9
Status: VALIDATED
- Source sequence(s)
-
AC024952, AC025594
- Related
- ENSP00000420509.1, ENST00000487361.5
-
NM_001367766.1 → NP_001354695.1 coiled-coil domain-containing protein 136 isoform 10
Status: VALIDATED
- Source sequence(s)
-
AC024952, AC025594
-
NM_022742.5 → NP_073579.5 coiled-coil domain-containing protein 136 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AC024952, AC025594
- Consensus CDS
-
CCDS47704.1
- UniProtKB/Swiss-Prot
- A4D1K1, A7MCY7, A8MYA7, Q6ZVK7, Q96JN2, Q9H8M3, Q9UFE1
- UniProtKB/TrEMBL
-
H7C4R2
- Related
- ENSP00000297788.4, ENST00000297788.9
- Conserved Domains (1) summary
-
- cl25732
Location:34 → 401
- SMC_N; RecF/RecN/SMC N terminal domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000007.14 Reference GRCh38.p14 Primary Assembly
- Range
-
128790761..128822130
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_024446874.2 → XP_024302642.1 coiled-coil domain-containing protein 136 isoform X12
- UniProtKB/TrEMBL
-
H7C4R2
- Conserved Domains (1) summary
-
- cl25732
Location:34 → 401
- SMC_N; RecF/RecN/SMC N terminal domain
-
XM_047420722.1 → XP_047276678.1 coiled-coil domain-containing protein 136 isoform X5
-
XM_011516483.2 → XP_011514785.1 coiled-coil domain-containing protein 136 isoform X6
- UniProtKB/TrEMBL
-
H7C4R2
- Conserved Domains (2) summary
-
- TIGR02168
Location:275 → 1044
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cl23720
Location:105 → 194
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
XM_011516484.2 → XP_011514786.1 coiled-coil domain-containing protein 136 isoform X7
- Conserved Domains (2) summary
-
- TIGR02168
Location:275 → 1044
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cl23720
Location:105 → 194
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
XM_011516489.2 → XP_011514791.1 coiled-coil domain-containing protein 136 isoform X13
- Conserved Domains (1) summary
-
- cl23720
Location:105 → 194
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
XM_011516485.2 → XP_011514787.1 coiled-coil domain-containing protein 136 isoform X8
- UniProtKB/TrEMBL
-
H7C4R2
- Conserved Domains (2) summary
-
- TIGR02168
Location:275 → 1043
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cl23720
Location:105 → 194
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
XM_024446872.2 → XP_024302640.1 coiled-coil domain-containing protein 136 isoform X1
- Conserved Domains (1) summary
-
- cl25732
Location:84 → 451
- SMC_N; RecF/RecN/SMC N terminal domain
-
XM_011516486.2 → XP_011514788.1 coiled-coil domain-containing protein 136 isoform X9
- UniProtKB/TrEMBL
-
H7C4R2
- Conserved Domains (3) summary
-
- TIGR02168
Location:263 → 1032
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam17045
Location:138 → 389
- CEP63; Centrosomal protein of 63 kDa
- cl23720
Location:105 → 194
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
XM_017012532.2 → XP_016868021.1 coiled-coil domain-containing protein 136 isoform X2
- UniProtKB/TrEMBL
-
H7C4R2
-
XM_047420720.1 → XP_047276676.1 coiled-coil domain-containing protein 136 isoform X3
-
XM_011516488.3 → XP_011514790.1 coiled-coil domain-containing protein 136 isoform X11
- Conserved Domains (2) summary
-
- TIGR02168
Location:275 → 1044
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cl23720
Location:105 → 194
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
XM_047420721.1 → XP_047276677.1 coiled-coil domain-containing protein 136 isoform X4
-
XM_011516487.3 → XP_011514789.1 coiled-coil domain-containing protein 136 isoform X10
- UniProtKB/TrEMBL
-
H7C4R2
- Conserved Domains (2) summary
-
- TIGR02168
Location:275 → 1044
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cl23720
Location:105 → 194
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
XM_011516490.3 → XP_011514792.1 coiled-coil domain-containing protein 136 isoform X14
- Conserved Domains (1) summary
-
- cl23720
Location:105 → 194
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
XM_024446873.2 → XP_024302641.1 coiled-coil domain-containing protein 136 isoform X12
- UniProtKB/TrEMBL
-
H7C4R2
- Conserved Domains (1) summary
-
- cl25732
Location:34 → 401
- SMC_N; RecF/RecN/SMC N terminal domain
-
XM_024446875.2 → XP_024302643.1 coiled-coil domain-containing protein 136 isoform X15
- Conserved Domains (1) summary
-
- cl25732
Location:314 → 438
- SMC_N; RecF/RecN/SMC N terminal domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060931.1 Alternate T2T-CHM13v2.0
- Range
-
130102911..130135058
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054358816.1 → XP_054214791.1 coiled-coil domain-containing protein 136 isoform X17
- UniProtKB/TrEMBL
-
H7C4R2
-
XM_054358814.1 → XP_054214789.1 coiled-coil domain-containing protein 136 isoform X5
-
XM_054358809.1 → XP_054214784.1 coiled-coil domain-containing protein 136 isoform X1
-
XM_054358810.1 → XP_054214785.1 coiled-coil domain-containing protein 136 isoform X2
- UniProtKB/TrEMBL
-
H7C4R2
-
XM_054358811.1 → XP_054214786.1 coiled-coil domain-containing protein 136 isoform X3
-
XM_054358813.1 → XP_054214788.1 coiled-coil domain-containing protein 136 isoform X4
-
XM_054358812.1 → XP_054214787.1 coiled-coil domain-containing protein 136 isoform X16
- UniProtKB/TrEMBL
-
H7C4R2
-
XM_054358818.1 → XP_054214793.1 coiled-coil domain-containing protein 136 isoform X19
-
XM_054358819.1 → XP_054214794.1 coiled-coil domain-containing protein 136 isoform X20
-
XM_054358815.1 → XP_054214790.1 coiled-coil domain-containing protein 136 isoform X17
- UniProtKB/TrEMBL
-
H7C4R2
-
XM_054358817.1 → XP_054214792.1 coiled-coil domain-containing protein 136 isoform X18
- UniProtKB/TrEMBL
-
H7C4R2