Sertm1 serine rich and transmembrane domain containing 1 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Sertm1provided by MGI
Official Full Name: serine rich and transmembrane domain containing 1provided by MGI
Primary source: MGI:MGI:3607715
See related: Ensembl:ENSMUSG00000056306 AllianceGenome:MGI:3607715
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: 6030405A18Rik
Summary: Predicted to be located in membrane. Predicted to be active in intracellular membrane-bounded organelle. Orthologous to human SERTM1 (serine rich and transmembrane domain containing 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression: Biased expression in CNS E18 (RPKM 4.5), cortex adult (RPKM 3.7) and 11 other tissues See more
Orthologs: human all
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Genomic context

Location:: 3 C; 3 25.9 cM

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	3	NC_000069.7 (54804489..54823308, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	3	NC_000069.6 (54897068..54915887, complement)

Chromosome 3 - NC_000069.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (2)

General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in intracellular membrane-bounded organelle	IBA Inferred from Biological aspect of Ancestor more info
located_in intracellular membrane-bounded organelle	IEA Inferred from Electronic Annotation more info
located_in intracellular membrane-bounded organelle	ISO Inferred from Sequence Orthology more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: serine-rich and transmembrane domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_177854.4 → NP_808522.1 serine-rich and transmembrane domain-containing protein 1

See identical proteins and their annotated locations for NP_808522.1

Status: VALIDATED

Source sequence(s)

AC142452

Consensus CDS

CCDS17355.1

UniProtKB/Swiss-Prot

Q8CD78

Related

ENSMUSP00000064870.4, ENSMUST00000070342.4

Conserved Domains (1) summary

pfam15872
Location:12 → 106

SRTM1; Serine-rich and transmembrane domain-containing protein 1