U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Slc25a35 solute carrier family 25, member 35 [ Mus musculus (house mouse) ]

    Gene ID: 71998, updated on 3-Dec-2024

    Summary

    Official Symbol
    Slc25a35provided by MGI
    Official Full Name
    solute carrier family 25, member 35provided by MGI
    Primary source
    MGI:MGI:1919248
    See related
    Ensembl:ENSMUSG00000018740 AllianceGenome:MGI:1919248
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1810012H11Rik
    Summary
    Located in mitochondrion. Is expressed in several structures, including alimentary system; brain; mammary gland; olfactory epithelium; and thymus. Orthologous to human SLC25A35 (solute carrier family 25 member 35). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in mammary gland adult (RPKM 33.7), ovary adult (RPKM 32.6) and 18 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Slc25a35 in Genome Data Viewer
    Location:
    11 B3; 11 42.24 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (68858954..68863342)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (68968096..68972516)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene Rho guanine nucleotide exchange factor 15 Neighboring gene predicted gene, 51902 Neighboring gene STARR-positive B cell enhancer ABC_E8415 Neighboring gene predicted gene, 32273 Neighboring gene STARR-positive B cell enhancer ABC_E2994 Neighboring gene STARR-positive B cell enhancer ABC_E11482 Neighboring gene RAN guanine nucleotide release factor Neighboring gene predicted gene, 32384 Neighboring gene phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) Neighboring gene microRNA 3062

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    General protein information

    Preferred Names
    solute carrier family 25 member 35

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001418040.1NP_001404969.1  solute carrier family 25 member 35 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AL603662
    2. NM_001418041.1NP_001404970.1  solute carrier family 25 member 35 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AL603662
      UniProtKB/TrEMBL
      A0A0A0MQ70
    3. NM_001418042.1NP_001404971.1  solute carrier family 25 member 35 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AL603662
      UniProtKB/Swiss-Prot
      Q3TBP2, Q5SWT3, Q99KM5, Q9D913
      UniProtKB/TrEMBL
      A0A0A0MQ70
    4. NM_001418043.1NP_001404972.1  solute carrier family 25 member 35 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AL603662
    5. NM_028048.3NP_082324.1  solute carrier family 25 member 35 isoform 1

      See identical proteins and their annotated locations for NP_082324.1

      Status: VALIDATED

      Source sequence(s)
      AL603662
      Consensus CDS
      CCDS24874.1
      UniProtKB/Swiss-Prot
      Q3TBP2, Q5SWT3, Q99KM5, Q9D913
      UniProtKB/TrEMBL
      A0A0A0MQ70
      Related
      ENSMUSP00000099666.4, ENSMUST00000102606.10
      Conserved Domains (1) summary
      pfam00153
      Location:284
      Mito_carr; Mitochondrial carrier protein

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      68858954..68863342
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)