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    Pdxk-ps pyridoxal (pyridoxine, vitamin B6) kinase, pseudogene [ Mus musculus (house mouse) ]

    Gene ID: 435518, updated on 17-Aug-2024

    Summary

    Official Symbol
    Pdxk-psprovided by MGI
    Official Full Name
    pyridoxal (pyridoxine, vitamin B6) kinase, pseudogeneprovided by MGI
    Primary source
    MGI:MGI:1933201
    See related
    Ensembl:ENSMUSG00000121449 AllianceGenome:MGI:1933201
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm9743
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Pdxk-ps in Genome Data Viewer
    Location:
    17 B1; 17 17.35 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (32295057..32310397, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (32076083..32091423, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_42364 Neighboring gene heat shock transcription factor 2 binding protein Neighboring gene ribosomal RNA processing 1B Neighboring gene STARR-seq mESC enhancer starr_42366 Neighboring gene STARR-positive B cell enhancer ABC_E4204 Neighboring gene predicted gene, 30729 Neighboring gene predicted gene, 38585 Neighboring gene notch 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_027316.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK138248, CT033797
      Related
      ENSMUST00000159650.8

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      32295057..32310397 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)