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    Ephx3 epoxide hydrolase 3 [ Mus musculus (house mouse) ]

    Gene ID: 71932, updated on 9-Dec-2024

    Summary

    Official Symbol
    Ephx3provided by MGI
    Official Full Name
    epoxide hydrolase 3provided by MGI
    Primary source
    MGI:MGI:1919182
    See related
    Ensembl:ENSMUSG00000037577 AllianceGenome:MGI:1919182
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EH3; Abhd9; 2310063B19Rik
    Summary
    Predicted to enable epoxide hydrolase activity. Predicted to be involved in epoxide metabolic process. Predicted to be located in membrane. Predicted to be active in intracellular membrane-bounded organelle. Orthologous to human EPHX3 (epoxide hydrolase 3). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in stomach adult (RPKM 8.4), lung adult (RPKM 2.9) and 6 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Ephx3 in Genome Data Viewer
    Location:
    17 B1; 17 17.39 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (32402742..32408444, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (32183770..32189470, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 38585 Neighboring gene notch 3 Neighboring gene predicted gene, 41568 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:32301287-32301488 Neighboring gene VISTA enhancer mm1733 Neighboring gene bromodomain containing 4 Neighboring gene predicted gene 4432 Neighboring gene STARR-positive B cell enhancer ABC_E11795 Neighboring gene STARR-positive B cell enhancer ABC_E5590 Neighboring gene STARR-positive B cell enhancer ABC_E955 Neighboring gene A kinase anchor protein 8

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables epoxide hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables epoxide hydrolase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables hydrolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in epoxide metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in intracellular membrane-bounded organelle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    epoxide hydrolase 3
    Names
    abhydrolase domain-containing protein 9
    NP_001028335.1
    NP_001334270.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033163.4NP_001028335.1  epoxide hydrolase 3 isoform 1

      See identical proteins and their annotated locations for NP_001028335.1

      Status: VALIDATED

      Source sequence(s)
      CT033755
      Consensus CDS
      CCDS28615.1
      UniProtKB/TrEMBL
      A0A0R4J127, A6H695
      Related
      ENSMUSP00000085013.4, ENSMUST00000087721.10
      Conserved Domains (2) summary
      COG0596
      Location:144415
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
      cl21494
      Location:139262
      Abhydrolase; alpha/beta hydrolases
    2. NM_001347341.2NP_001334270.1  epoxide hydrolase 3 isoform 2

      Status: VALIDATED

      Source sequence(s)
      CT033755
      Consensus CDS
      CCDS84290.1
      UniProtKB/TrEMBL
      A6H695, G3XA19
      Related
      ENSMUSP00000124600.2, ENSMUST00000162117.3

    RNA

    1. NR_175782.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      CT033755

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      32402742..32408444 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)