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    Zfp811 zinc finger protein 811 [ Mus musculus (house mouse) ]

    Gene ID: 240063, updated on 9-Dec-2024

    Summary

    Official Symbol
    Zfp811provided by MGI
    Official Full Name
    zinc finger protein 811provided by MGI
    Primary source
    MGI:MGI:2682944
    See related
    Ensembl:ENSMUSG00000055202 AllianceGenome:MGI:2682944
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in gut; nervous system; and neural retina. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in CNS E11.5 (RPKM 8.3), CNS E14 (RPKM 8.0) and 7 other tissues See more
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    Genomic context

    See Zfp811 in Genome Data Viewer
    Location:
    17 B1; 17 17.98 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (33014650..33029033, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (32795676..32810057, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein 871 Neighboring gene STARR-positive B cell enhancer mm9_chr17:32925111-32925412 Neighboring gene predicted gene 17115 Neighboring gene predicted gene, 23294 Neighboring gene zinc finger protein 799 Neighboring gene zinc finger protein 458 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001267583.1NP_001254512.1  zinc finger protein 811 isoform 2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate splice site in the 3' region, which results in an early stop codon, compared to variant 1. The encoded isoform (2) has a shorter C-terminus, compared to isoform 1.
      Source sequence(s)
      AI413693, AK132056, BM951801, CT485613
      Consensus CDS
      CCDS89068.1
      UniProtKB/TrEMBL
      A0A3Q4EGT7
      Related
      ENSMUSP00000157159.2, ENSMUST00000234594.2
      Conserved Domains (2) summary
      smart00349
      Location:444
      KRAB; krueppel associated box
      pfam01352
      Location:443
      KRAB; KRAB box
    2. NM_183177.3NP_899000.2  zinc finger protein 811 isoform 1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) encodes the longer isoform (1).
      Source sequence(s)
      AI413693, AK132056, BC052046, CT485613
      Consensus CDS
      CCDS79528.1
      UniProtKB/TrEMBL
      A0A0J9YU71
      Related
      ENSMUSP00000144038.2, ENSMUST00000200914.5
      Conserved Domains (5) summary
      smart00349
      Location:444
      KRAB; krueppel associated box
      COG5048
      Location:217547
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:279299
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:443
      KRAB; KRAB box
      pfam13465
      Location:319344
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      33014650..33029033 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017317470.3XP_017172959.1  zinc finger protein 811 isoform X1

      Conserved Domains (3) summary
      COG5048
      Location:208357
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:265285
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:230
      KRAB; KRAB box
    2. XM_030249792.2XP_030105652.1  zinc finger protein 811 isoform X1

      Related
      ENSMUSP00000079709.7, ENSMUST00000080905.7
      Conserved Domains (3) summary
      COG5048
      Location:208357
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:265285
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:230
      KRAB; KRAB box
    3. XM_011246439.3XP_011244741.1  zinc finger protein 811 isoform X2

      Conserved Domains (2) summary
      COG5048
      Location:206355
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:263283
      ZF_C2H2; C2H2 Zn finger [structural motif]