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    Lce3e late cornified envelope 3E [ Mus musculus (house mouse) ]

    Gene ID: 69514, updated on 9-Dec-2024

    Summary

    Official Symbol
    Lce3eprovided by MGI
    Official Full Name
    late cornified envelope 3Eprovided by MGI
    Primary source
    MGI:MGI:1916764
    See related
    Ensembl:ENSMUSG00000074433 AllianceGenome:MGI:1916764
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2310001H18Rik
    Summary
    Orthologous to several human genes including LCE3B (late cornified envelope 3B) and LCE3C (late cornified envelope 3C). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward stomach adult (RPKM 149.1) See more
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    Genomic context

    See Lce3e in Genome Data Viewer
    Location:
    3 F1; 3 40.14 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (92874368..92875588)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (92967061..92968281)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene late cornified envelope 3D Neighboring gene predicted gene, 22577 Neighboring gene late cornified envelope 3F Neighboring gene cysteine-rich C-terminal 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    late cornified envelope protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001254725.1NP_001241654.1  late cornified envelope protein

      Status: VALIDATED

      Source sequence(s)
      AC132274
      Consensus CDS
      CCDS57229.1
      UniProtKB/TrEMBL
      F8VQJ0
      Related
      ENSMUSP00000096484.5, ENSMUST00000098886.5

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      92874368..92875588
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)