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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001288622.3 → NP_001275551.1 islet cell autoantigen 1-like protein isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks a 5' non-coding exon, therefore, has a shorter 5' UTR compared to variant 1. Variants 1, 3 and 4 encode the same isoform (1).
- Source sequence(s)
-
AC098831, AK092310, AK124756, AL833904, BC063876
- Consensus CDS
-
CCDS2354.1
- UniProtKB/Swiss-Prot
- B3KRW6, Q53P45, Q53QZ4, Q53T97, Q8NDH6, Q96N47, Q96Q32, Q9BVQ2
- UniProtKB/TrEMBL
-
F8WBQ1
- Related
- ENSP00000351047.2, ENST00000358299.7
- Conserved Domains (2) summary
-
- cd07661
Location:46 → 248
- BAR_ICA69; The Bin/Amphiphysin/Rvs (BAR) domain of Islet Cell Autoantigen 69-kDa
- pfam04629
Location:254 → 482
- ICA69; Islet cell autoantigen ICA69, C-terminal domain
-
NM_001288623.2 → NP_001275552.1 islet cell autoantigen 1-like protein isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1, 3 and 4 encode the same isoform (1).
- Source sequence(s)
-
AB053316, AC010900, AC098831, AK055978, AK124756, AL833904, BC063876, DB496884
- Consensus CDS
-
CCDS2354.1
- UniProtKB/Swiss-Prot
- B3KRW6, Q53P45, Q53QZ4, Q53T97, Q8NDH6, Q96N47, Q96Q32, Q9BVQ2
- UniProtKB/TrEMBL
-
F8WBQ1
- Related
- ENSP00000478645.1, ENST00000617388.4
- Conserved Domains (2) summary
-
- cd07661
Location:46 → 248
- BAR_ICA69; The Bin/Amphiphysin/Rvs (BAR) domain of Islet Cell Autoantigen 69-kDa
- pfam04629
Location:254 → 482
- ICA69; Islet cell autoantigen ICA69, C-terminal domain
-
NM_001288624.2 → NP_001275553.1 islet cell autoantigen 1-like protein isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs at the 5' and 3' ends, however, uses the same translation initiation codon but terminates at an alternate stop codon compared to variant 1. The resulting shorter isoform (3) has a distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
BC000993
- Consensus CDS
-
CCDS74632.1
- UniProtKB/TrEMBL
-
C9JAQ4
- Related
- ENSP00000404189.1, ENST00000425178.5
- Conserved Domains (1) summary
-
- cl12013
Location:46 → 187
- BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
-
NM_138468.7 → NP_612477.3 islet cell autoantigen 1-like protein isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1). Variants 1, 3 and 4 encode the same isoform.
- Source sequence(s)
-
AC098831, AK092310, AK124756, AL833904, BC063876
- Consensus CDS
-
CCDS2354.1
- UniProtKB/Swiss-Prot
- B3KRW6, Q53P45, Q53QZ4, Q53T97, Q8NDH6, Q96N47, Q96Q32, Q9BVQ2
- UniProtKB/TrEMBL
-
F8WBQ1
- Related
- ENSP00000376070.2, ENST00000392237.6
- Conserved Domains (2) summary
-
- cd07661
Location:46 → 248
- BAR_ICA69; The Bin/Amphiphysin/Rvs (BAR) domain of Islet Cell Autoantigen 69-kDa
- pfam04629
Location:254 → 482
- ICA69; Islet cell autoantigen ICA69, C-terminal domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
202773176..202871766 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
203254630..203353223 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_178231.2: Suppressed sequence
- Description
- NM_178231.2: This RefSeq was temporarily suppressed because currently there is not sufficient data to support this transcript.